Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 AL139011.1-202ENST00000642063 584 ntBASIC12.44□□□□□ -0.42
TRAPPC1Q9Y5R8 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAPPC1Q9Y5R8 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC12.44□□□□□ -0.42
TRAPPC1Q9Y5R8 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
TRAPPC1Q9Y5R8 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAPPC1Q9Y5R8 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAPPC1Q9Y5R8 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAPPC1Q9Y5R8 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAPPC1Q9Y5R8 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
TRAPPC1Q9Y5R8 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAPPC1Q9Y5R8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
TRAPPC1Q9Y5R8 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
TRAPPC1Q9Y5R8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC12.44□□□□□ -0.42
TRAPPC1Q9Y5R8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRAPPC1Q9Y5R8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TRAPPC1Q9Y5R8 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
TRAPPC1Q9Y5R8 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRAPPC1Q9Y5R8 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAPPC1Q9Y5R8 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TRAPPC1Q9Y5R8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 PPP1R14BP2-201ENST00000426284 444 ntBASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 SLC25A1P4-201ENST00000567977 778 ntBASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 AC009154.2-201ENST00000621177 724 ntBASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 CICP20-201ENST00000443330 2801 ntBASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAPPC1Q9Y5R8 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 MIR648-201ENST00000385046 94 ntBASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 COX5BP2-201ENST00000392354 334 ntBASIC12.42□□□□□ -0.42
TRAPPC1Q9Y5R8 AC239809.2-201ENST00000415381 517 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms