Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.23■□□□□ 0.35
PCDHGC3Q9UN70 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDHGC3Q9UN70 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGC3Q9UN70 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGC3Q9UN70 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
PCDHGC3Q9UN70 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
PCDHGC3Q9UN70 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHGC3Q9UN70 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGC3Q9UN70 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGC3Q9UN70 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGC3Q9UN70 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGC3Q9UN70 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGC3Q9UN70 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGC3Q9UN70 LINC02447-202ENST00000501888 2146 ntBASIC17.23■□□□□ 0.35
PCDHGC3Q9UN70 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHGC3Q9UN70 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 AC112504.1-201ENST00000623415 1841 ntBASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 AC004461.1-201ENST00000412461 403 ntBASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 AP000344.2-201ENST00000512987 629 ntBASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGC3Q9UN70 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 HLA-H-201ENST00000383620 1096 ntBASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 SLC25A39P2-201ENST00000537614 270 ntBASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 AC092865.5-201ENST00000545435 363 ntBASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 AC055717.3-201ENST00000622967 595 ntBASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 Z99916.3-201ENST00000623422 1080 ntBASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDHGC3Q9UN70 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms