Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHB16Q9NRJ7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHB16Q9NRJ7 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHB16Q9NRJ7 OR2I1P-209ENST00000641730 5365 ntBASIC14.33□□□□□ -0.11
PCDHB16Q9NRJ7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHB16Q9NRJ7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.33□□□□□ -0.11
PCDHB16Q9NRJ7 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHB16Q9NRJ7 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHB16Q9NRJ7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHB16Q9NRJ7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHB16Q9NRJ7 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
PCDHB16Q9NRJ7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 AC132008.2-207ENST00000454517 770 ntBASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 AC139887.3-201ENST00000568585 713 ntBASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHB16Q9NRJ7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 AL139424.1-201ENST00000607572 797 ntBASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHB16Q9NRJ7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms