Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TUBB1Q9H4B7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
TUBB1Q9H4B7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TUBB1Q9H4B7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.77■□□□□ 0.12
TUBB1Q9H4B7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.77■□□□□ 0.12
TUBB1Q9H4B7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TUBB1Q9H4B7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
TUBB1Q9H4B7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.77■□□□□ 0.12
TUBB1Q9H4B7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TUBB1Q9H4B7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
TUBB1Q9H4B7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TUBB1Q9H4B7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TUBB1Q9H4B7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.77■□□□□ 0.12
TUBB1Q9H4B7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TUBB1Q9H4B7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.77■□□□□ 0.12
TUBB1Q9H4B7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.77■□□□□ 0.12
TUBB1Q9H4B7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TUBB1Q9H4B7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.77■□□□□ 0.12
TUBB1Q9H4B7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TUBB1Q9H4B7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TUBB1Q9H4B7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.77■□□□□ 0.11
TUBB1Q9H4B7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TUBB1Q9H4B7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.77■□□□□ 0.11
TUBB1Q9H4B7 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.77■□□□□ 0.11
TUBB1Q9H4B7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TUBB1Q9H4B7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.77■□□□□ 0.11
TUBB1Q9H4B7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
TUBB1Q9H4B7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TUBB1Q9H4B7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
TUBB1Q9H4B7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.77■□□□□ 0.11
TUBB1Q9H4B7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
TUBB1Q9H4B7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TUBB1Q9H4B7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.77■□□□□ 0.11
TUBB1Q9H4B7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 VN2R19P-201ENST00000442399 1052 ntBASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB1Q9H4B7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 AC098831.1-202ENST00000438821 336 ntBASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 AC009947.1-201ENST00000444350 727 ntBASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms