Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AL603756.1-201ENST00000606511 2163 ntBASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 MIR346-201ENST00000362234 95 ntBASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 SPDYE7P-202ENST00000420373 878 ntBASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 AL138918.1-201ENST00000568306 659 ntBASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 Z92544.3-201ENST00000624747 417 ntBASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 AC006538.1-201ENST00000567905 1585 ntBASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 AL512652.2-201ENST00000625156 1716 ntBASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 GPS2P2-201ENST00000430745 888 ntBASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 ALG1L8P-201ENST00000533887 760 ntBASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 AL512356.2-201ENST00000546955 174 ntBASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 AC026150.2-201ENST00000564693 1156 ntBASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 AC073389.1-201ENST00000595595 795 ntBASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 AC073439.1-201ENST00000624121 1774 ntBASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP3Q9BWW4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 PCDHA14-201ENST00000506751 2298 ntBASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms