Protein–RNA interactions for Protein: Q8IV13

CCNJL, Cyclin-J-like protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNJLQ8IV13 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCNJLQ8IV13 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNJLQ8IV13 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNJLQ8IV13 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CCNJLQ8IV13 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCNJLQ8IV13 PCGF3-213ENST00000620529 1899 ntBASIC16.84■□□□□ 0.29
CCNJLQ8IV13 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCNJLQ8IV13 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCNJLQ8IV13 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CCNJLQ8IV13 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNJLQ8IV13 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.84■□□□□ 0.29
CCNJLQ8IV13 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCNJLQ8IV13 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCNJLQ8IV13 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCNJLQ8IV13 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CCNJLQ8IV13 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CCNJLQ8IV13 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 MCCD1P2-201ENST00000423228 335 ntBASIC16.83■□□□□ 0.28
CCNJLQ8IV13 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 AC006449.6-201ENST00000612330 2296 ntBASIC16.83■□□□□ 0.28
CCNJLQ8IV13 AC004790.2-201ENST00000623588 572 ntBASIC16.83■□□□□ 0.28
CCNJLQ8IV13 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 DBET-201ENST00000630918 3363 ntBASIC16.83■□□□□ 0.28
CCNJLQ8IV13 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNJLQ8IV13 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.82■□□□□ 0.28
CCNJLQ8IV13 SLC22A20-204ENST00000530038 1673 ntBASIC16.82■□□□□ 0.28
CCNJLQ8IV13 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 HCG4B-203ENST00000450128 991 ntBASIC16.82■□□□□ 0.28
CCNJLQ8IV13 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 AC107918.2-201ENST00000530817 355 ntBASIC16.82■□□□□ 0.28
CCNJLQ8IV13 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 AC018845.2-201ENST00000568326 409 ntBASIC16.82■□□□□ 0.28
CCNJLQ8IV13 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 AC020765.3-201ENST00000613051 740 ntBASIC16.82■□□□□ 0.28
CCNJLQ8IV13 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCNJLQ8IV13 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms