Protein–RNA interactions for Protein: Q7RTT5

SSX7, Protein SSX7, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX7Q7RTT5 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSX7Q7RTT5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SSX7Q7RTT5 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSX7Q7RTT5 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSX7Q7RTT5 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.13□□□□□ -0.31
SSX7Q7RTT5 AC132938.5-201ENST00000624980 1813 ntBASIC13.13□□□□□ -0.31
SSX7Q7RTT5 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SSX7Q7RTT5 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.13□□□□□ -0.31
SSX7Q7RTT5 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSX7Q7RTT5 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSX7Q7RTT5 AC125634.1-201ENST00000438758 1403 ntBASIC13.13□□□□□ -0.31
SSX7Q7RTT5 SSR4P1-203ENST00000599569 2260 ntBASIC13.13□□□□□ -0.31
SSX7Q7RTT5 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SSX7Q7RTT5 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSX7Q7RTT5 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSX7Q7RTT5 AC087386.2-201ENST00000623212 4637 ntBASIC13.12□□□□□ -0.31
SSX7Q7RTT5 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 AL021920.2-201ENST00000624828 1351 ntBASIC13.12□□□□□ -0.31
SSX7Q7RTT5 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 AC010203.1-204ENST00000548782 407 ntBASIC13.12□□□□□ -0.31
SSX7Q7RTT5 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 AC013467.2-201ENST00000605472 835 ntBASIC13.12□□□□□ -0.31
SSX7Q7RTT5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 AL139011.1-202ENST00000642063 584 ntBASIC13.12□□□□□ -0.31
SSX7Q7RTT5 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 AC006486.2-201ENST00000624246 2199 ntBASIC13.12□□□□□ -0.31
SSX7Q7RTT5 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 SNX33P1-201ENST00000592116 1762 ntBASIC13.12□□□□□ -0.31
SSX7Q7RTT5 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 AC016027.1-202ENST00000607927 1699 ntBASIC13.12□□□□□ -0.31
SSX7Q7RTT5 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSX7Q7RTT5 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.11□□□□□ -0.31
SSX7Q7RTT5 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSX7Q7RTT5 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSX7Q7RTT5 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.11□□□□□ -0.31
SSX7Q7RTT5 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.11□□□□□ -0.31
SSX7Q7RTT5 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSX7Q7RTT5 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSX7Q7RTT5 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSX7Q7RTT5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSX7Q7RTT5 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SSX7Q7RTT5 AC097637.2-201ENST00000624096 1997 ntBASIC13.11□□□□□ -0.31
SSX7Q7RTT5 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSX7Q7RTT5 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.11□□□□□ -0.31
SSX7Q7RTT5 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSX7Q7RTT5 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.11□□□□□ -0.31
SSX7Q7RTT5 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.11□□□□□ -0.31
SSX7Q7RTT5 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSX7Q7RTT5 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSX7Q7RTT5 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.11□□□□□ -0.31
SSX7Q7RTT5 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms