Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 POU5F1P6-201ENST00000466990 990 ntBASIC15.7■□□□□ 0.1
RNF44Q7L0R7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 LINC00628-201ENST00000628516 1289 ntBASIC15.7■□□□□ 0.1
RNF44Q7L0R7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF44Q7L0R7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 RBPMS2P1-201ENST00000437762 623 ntBASIC15.69■□□□□ 0.1
RNF44Q7L0R7 SPDYE14P-201ENST00000442619 822 ntBASIC15.69■□□□□ 0.1
RNF44Q7L0R7 AC098859.1-201ENST00000502915 1238 ntBASIC15.69■□□□□ 0.1
RNF44Q7L0R7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 AC109322.1-201ENST00000524499 1264 ntBASIC15.69■□□□□ 0.1
RNF44Q7L0R7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 SPTSSB-204ENST00000617024 1292 ntBASIC15.69■□□□□ 0.1
RNF44Q7L0R7 AP001059.3-201ENST00000619053 235 ntBASIC15.69■□□□□ 0.1
RNF44Q7L0R7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF44Q7L0R7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms