Protein–RNA interactions for Protein: Q5T2W1

PDZK1, Na(+)/H(+) exchange regulatory cofactor NHE-RF3, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZK1Q5T2W1 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 PRSS29P-201ENST00000440800 595 ntBASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 AC009947.1-201ENST00000444350 727 ntBASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 RNA5SP415-201ENST00000517246 115 ntBASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 IGHV3-22-201ENST00000520721 359 ntBASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 AP001350.2-201ENST00000625104 1094 ntBASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 AL512652.2-201ENST00000625156 1716 ntBASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 KRT8P39-201ENST00000396270 1433 ntBASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDZK1Q5T2W1 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 HCG4-201ENST00000418983 998 ntBASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 ACTL9-202ENST00000612068 1252 ntBASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 AC023824.1-201ENST00000562945 2975 ntBASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDZK1Q5T2W1 AC092364.2-201ENST00000596710 2692 ntBASIC15.4■□□□□ 0.06
PDZK1Q5T2W1 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDZK1Q5T2W1 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDZK1Q5T2W1 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.4■□□□□ 0.06
PDZK1Q5T2W1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.4■□□□□ 0.06
PDZK1Q5T2W1 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDZK1Q5T2W1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.4■□□□□ 0.06
PDZK1Q5T2W1 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.4■□□□□ 0.06
PDZK1Q5T2W1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
PDZK1Q5T2W1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDZK1Q5T2W1 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.4■□□□□ 0.06
PDZK1Q5T2W1 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDZK1Q5T2W1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDZK1Q5T2W1 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDZK1Q5T2W1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDZK1Q5T2W1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDZK1Q5T2W1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PDZK1Q5T2W1 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDZK1Q5T2W1 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms