Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 ALOX12P2-203ENST00000570921 1945 ntBASIC19.45■□□□□ 0.7
PDS5AQ29RF7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDS5AQ29RF7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 CR383656.12-201ENST00000549567 513 ntBASIC19.44■□□□□ 0.7
PDS5AQ29RF7 AL596325.1-201ENST00000563991 1082 ntBASIC19.44■□□□□ 0.7
PDS5AQ29RF7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PDS5AQ29RF7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
PDS5AQ29RF7 SLC7A15P-201ENST00000424028 1363 ntBASIC19.43■□□□□ 0.7
PDS5AQ29RF7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.43■□□□□ 0.7
PDS5AQ29RF7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDS5AQ29RF7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PDS5AQ29RF7 AC099398.1-201ENST00000567919 2776 ntBASIC19.43■□□□□ 0.7
PDS5AQ29RF7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDS5AQ29RF7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PDS5AQ29RF7 AC007541.1-201ENST00000570282 1469 ntBASIC19.43■□□□□ 0.7
PDS5AQ29RF7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PDS5AQ29RF7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
PDS5AQ29RF7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDS5AQ29RF7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PDS5AQ29RF7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDS5AQ29RF7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDS5AQ29RF7 SPDYE19P-201ENST00000338590 713 ntBASIC19.43■□□□□ 0.7
PDS5AQ29RF7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDS5AQ29RF7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDS5AQ29RF7 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDS5AQ29RF7 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.43■□□□□ 0.7
PDS5AQ29RF7 AC055876.2-201ENST00000531834 546 ntBASIC19.43■□□□□ 0.7
PDS5AQ29RF7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
PDS5AQ29RF7 AC106820.2-201ENST00000563775 3264 ntBASIC19.43■□□□□ 0.7
PDS5AQ29RF7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDS5AQ29RF7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.43■□□□□ 0.7
PDS5AQ29RF7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDS5AQ29RF7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 AC087499.6-201ENST00000411576 835 ntBASIC19.42■□□□□ 0.7
PDS5AQ29RF7 MEP1AP4-201ENST00000423244 1087 ntBASIC19.42■□□□□ 0.7
PDS5AQ29RF7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 GNAQP1-201ENST00000444815 1067 ntBASIC19.42■□□□□ 0.7
PDS5AQ29RF7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 AL035252.4-201ENST00000624174 288 ntBASIC19.42■□□□□ 0.7
PDS5AQ29RF7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms