Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DEFA3P59666 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.4□□□□□ -0.1
DEFA3P59666 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.4□□□□□ -0.11
DEFA3P59666 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
DEFA3P59666 AC117489.1-201ENST00000625169 3217 ntBASIC14.39□□□□□ -0.11
DEFA3P59666 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.39□□□□□ -0.11
DEFA3P59666 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
DEFA3P59666 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
DEFA3P59666 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 KRT89P-201ENST00000620027 1478 ntBASIC14.39□□□□□ -0.11
DEFA3P59666 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
DEFA3P59666 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
DEFA3P59666 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
DEFA3P59666 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
DEFA3P59666 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
DEFA3P59666 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.39□□□□□ -0.11
DEFA3P59666 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC14.39□□□□□ -0.11
DEFA3P59666 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.39□□□□□ -0.11
DEFA3P59666 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.39□□□□□ -0.11
DEFA3P59666 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
DEFA3P59666 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.39□□□□□ -0.11
DEFA3P59666 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC14.39□□□□□ -0.11
DEFA3P59666 AC013467.2-201ENST00000605472 835 ntBASIC14.39□□□□□ -0.11
DEFA3P59666 AC019129.2-201ENST00000609837 1235 ntBASIC14.39□□□□□ -0.11
DEFA3P59666 INO80E-214ENST00000620599 515 ntTSL 2 BASIC14.39□□□□□ -0.11
DEFA3P59666 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.39□□□□□ -0.11
DEFA3P59666 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.39□□□□□ -0.11
DEFA3P59666 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
DEFA3P59666 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
DEFA3P59666 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
DEFA3P59666 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 AL135999.2-201ENST00000622438 1686 ntBASIC14.39□□□□□ -0.11
DEFA3P59666 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.39□□□□□ -0.11
DEFA3P59666 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.39□□□□□ -0.11
DEFA3P59666 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.39□□□□□ -0.11
DEFA3P59666 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA3P59666 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC14.39□□□□□ -0.11
DEFA3P59666 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
DEFA3P59666 DMBT1P1-203ENST00000636837 4628 ntBASIC14.38□□□□□ -0.11
DEFA3P59666 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
DEFA3P59666 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
DEFA3P59666 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.38□□□□□ -0.11
DEFA3P59666 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
DEFA3P59666 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA3P59666 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
DEFA3P59666 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA3P59666 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA3P59666 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.38□□□□□ -0.11
DEFA3P59666 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.38□□□□□ -0.11
DEFA3P59666 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA3P59666 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA3P59666 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA3P59666 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA3P59666 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.38□□□□□ -0.11
DEFA3P59666 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.38□□□□□ -0.11
DEFA3P59666 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA3P59666 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA3P59666 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
DEFA3P59666 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
DEFA3P59666 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA3P59666 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.38□□□□□ -0.11
DEFA3P59666 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA3P59666 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA3P59666 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.38□□□□□ -0.11
DEFA3P59666 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA3P59666 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
DEFA3P59666 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
DEFA3P59666 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA3P59666 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA3P59666 KRT17P3-201ENST00000420566 1262 ntBASIC14.38□□□□□ -0.11
DEFA3P59666 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.38□□□□□ -0.11
DEFA3P59666 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.38□□□□□ -0.11
DEFA3P59666 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.38□□□□□ -0.11
DEFA3P59666 LGR4-203ENST00000480977 492 ntTSL 2 BASIC14.38□□□□□ -0.11
DEFA3P59666 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.38□□□□□ -0.11
DEFA3P59666 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms