Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLCSP50747 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.71■□□□□ 0.11
HLCSP50747 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HLCSP50747 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLCSP50747 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
HLCSP50747 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
HLCSP50747 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLCSP50747 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.71■□□□□ 0.11
HLCSP50747 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.71■□□□□ 0.11
HLCSP50747 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.71■□□□□ 0.11
HLCSP50747 KRT19P2-202ENST00000557173 1012 ntBASIC15.71■□□□□ 0.11
HLCSP50747 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.71■□□□□ 0.11
HLCSP50747 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.71■□□□□ 0.11
HLCSP50747 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.71■□□□□ 0.11
HLCSP50747 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.71■□□□□ 0.11
HLCSP50747 AC023141.13-201ENST00000604991 943 ntBASIC15.71■□□□□ 0.11
HLCSP50747 AL691403.2-201ENST00000618460 490 ntBASIC15.71■□□□□ 0.11
HLCSP50747 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.71■□□□□ 0.11
HLCSP50747 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLCSP50747 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.71■□□□□ 0.11
HLCSP50747 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLCSP50747 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
HLCSP50747 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.71■□□□□ 0.11
HLCSP50747 ME2P1-201ENST00000426028 1970 ntBASIC15.71■□□□□ 0.1
HLCSP50747 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
HLCSP50747 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HLCSP50747 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
HLCSP50747 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLCSP50747 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.7■□□□□ 0.1
HLCSP50747 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLCSP50747 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.7■□□□□ 0.1
HLCSP50747 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLCSP50747 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLCSP50747 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.7■□□□□ 0.1
HLCSP50747 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLCSP50747 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLCSP50747 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLCSP50747 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HLCSP50747 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLCSP50747 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLCSP50747 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLCSP50747 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLCSP50747 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLCSP50747 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.7■□□□□ 0.1
HLCSP50747 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.7■□□□□ 0.1
HLCSP50747 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.7■□□□□ 0.1
HLCSP50747 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.7■□□□□ 0.1
HLCSP50747 SLC25A6P2-201ENST00000497974 877 ntBASIC15.7■□□□□ 0.1
HLCSP50747 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.7■□□□□ 0.1
HLCSP50747 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.7■□□□□ 0.1
HLCSP50747 PDPK2P-202ENST00000562415 1191 ntBASIC15.7■□□□□ 0.1
HLCSP50747 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
HLCSP50747 AC005829.1-201ENST00000570002 483 ntBASIC15.7■□□□□ 0.1
HLCSP50747 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLCSP50747 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.7■□□□□ 0.1
HLCSP50747 C20orf181-201ENST00000623918 480 ntBASIC15.7■□□□□ 0.1
HLCSP50747 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLCSP50747 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLCSP50747 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HLCSP50747 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLCSP50747 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.7■□□□□ 0.1
HLCSP50747 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLCSP50747 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLCSP50747 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.7■□□□□ 0.1
HLCSP50747 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLCSP50747 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLCSP50747 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLCSP50747 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.7■□□□□ 0.1
HLCSP50747 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLCSP50747 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLCSP50747 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLCSP50747 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.69■□□□□ 0.1
HLCSP50747 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLCSP50747 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.69■□□□□ 0.1
HLCSP50747 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLCSP50747 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLCSP50747 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLCSP50747 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.69■□□□□ 0.1
HLCSP50747 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.69■□□□□ 0.1
HLCSP50747 AP002490.2-201ENST00000524791 560 ntBASIC15.69■□□□□ 0.1
HLCSP50747 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.69■□□□□ 0.1
HLCSP50747 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.69■□□□□ 0.1
HLCSP50747 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLCSP50747 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLCSP50747 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLCSP50747 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.69■□□□□ 0.1
HLCSP50747 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.69■□□□□ 0.1
HLCSP50747 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLCSP50747 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLCSP50747 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.69■□□□□ 0.1
HLCSP50747 AC006058.4-201ENST00000624016 1670 ntBASIC15.69■□□□□ 0.1
HLCSP50747 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLCSP50747 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLCSP50747 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HLCSP50747 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLCSP50747 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HLCSP50747 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.69■□□□□ 0.1
HLCSP50747 AC025580.3-201ENST00000617932 1424 ntBASIC15.68■□□□□ 0.1
HLCSP50747 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLCSP50747 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms