Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
PCP4P48539 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
PCP4P48539 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
PCP4P48539 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC11.02□□□□□ -0.65
PCP4P48539 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC11.02□□□□□ -0.65
PCP4P48539 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
PCP4P48539 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
PCP4P48539 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.02□□□□□ -0.65
PCP4P48539 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC11.02□□□□□ -0.65
PCP4P48539 RNF10-201ENST00000325954 3825 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
PCP4P48539 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
PCP4P48539 L1CAM-201ENST00000361699 3888 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PCP4P48539 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
PCP4P48539 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PCP4P48539 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
PCP4P48539 TIGAR-204ENST00000635110 3633 ntTSL 5 BASIC11.02□□□□□ -0.65
PCP4P48539 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PCP4P48539 VIPAS39-206ENST00000553888 2934 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
PCP4P48539 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC11.01□□□□□ -0.65
PCP4P48539 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
PCP4P48539 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
PCP4P48539 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 CDH2-201ENST00000269141 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 NTM-206ENST00000427481 2583 ntTSL 5 BASIC11.01□□□□□ -0.65
PCP4P48539 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC11.01□□□□□ -0.65
PCP4P48539 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC11.01□□□□□ -0.65
PCP4P48539 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 AL359641.1-201ENST00000412509 1558 ntBASIC11.01□□□□□ -0.65
PCP4P48539 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC11.01□□□□□ -0.65
PCP4P48539 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
PCP4P48539 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 EPHB6-201ENST00000411471 3367 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
PCP4P48539 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
PCP4P48539 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC11.01□□□□□ -0.65
PCP4P48539 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC11.01□□□□□ -0.65
PCP4P48539 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC11.01□□□□□ -0.65
PCP4P48539 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
PCP4P48539 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC11.01□□□□□ -0.65
PCP4P48539 DNAJB12-204ENST00000461919 2369 ntTSL 2 BASIC11.01□□□□□ -0.65
PCP4P48539 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PCP4P48539 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC11□□□□□ -0.65
PCP4P48539 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 FCRLA-206ENST00000367949 1792 ntTSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 CR2-202ENST00000367058 4063 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 KIRREL1-201ENST00000359209 2874 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC11□□□□□ -0.65
PCP4P48539 RAB7B-201ENST00000617070 2888 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 RGS8-201ENST00000258302 5606 ntTSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC11□□□□□ -0.65
PCP4P48539 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC11□□□□□ -0.65
PCP4P48539 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 AL596087.1-201ENST00000400979 1969 ntBASIC11□□□□□ -0.65
PCP4P48539 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
PCP4P48539 FP325330.2-201ENST00000624219 5630 ntBASIC11□□□□□ -0.65
PCP4P48539 NFATC4-209ENST00000553879 2707 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
PCP4P48539 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC11□□□□□ -0.65
PCP4P48539 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
PCP4P48539 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 RAPGEF3-202ENST00000395358 4092 ntTSL 2 BASIC11□□□□□ -0.65
PCP4P48539 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms