Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS2P33552 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS2P33552 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS2P33552 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CKS2P33552 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS2P33552 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC12.11□□□□□ -0.47
CKS2P33552 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC12.11□□□□□ -0.47
CKS2P33552 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CKS2P33552 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CKS2P33552 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.11□□□□□ -0.47
CKS2P33552 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.11□□□□□ -0.47
CKS2P33552 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CKS2P33552 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CKS2P33552 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CKS2P33552 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.1□□□□□ -0.47
CKS2P33552 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.1□□□□□ -0.47
CKS2P33552 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CKS2P33552 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.1□□□□□ -0.47
CKS2P33552 CYP2D8P-201ENST00000433633 1490 ntBASIC12.1□□□□□ -0.47
CKS2P33552 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
CKS2P33552 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.1□□□□□ -0.47
CKS2P33552 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.1□□□□□ -0.47
CKS2P33552 MIR662-201ENST00000384847 95 ntBASIC12.1□□□□□ -0.47
CKS2P33552 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CKS2P33552 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC12.1□□□□□ -0.47
CKS2P33552 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC12.1□□□□□ -0.47
CKS2P33552 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC12.1□□□□□ -0.47
CKS2P33552 CLN6-221ENST00000637494 765 ntTSL 5 BASIC12.1□□□□□ -0.47
CKS2P33552 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CKS2P33552 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.1□□□□□ -0.47
CKS2P33552 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CKS2P33552 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.1□□□□□ -0.47
CKS2P33552 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.1□□□□□ -0.47
CKS2P33552 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.1□□□□□ -0.47
CKS2P33552 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC12.1□□□□□ -0.47
CKS2P33552 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CKS2P33552 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.1□□□□□ -0.47
CKS2P33552 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.1□□□□□ -0.47
CKS2P33552 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.09□□□□□ -0.47
CKS2P33552 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CKS2P33552 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CKS2P33552 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS2P33552 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS2P33552 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS2P33552 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS2P33552 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS2P33552 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.09□□□□□ -0.47
CKS2P33552 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
CKS2P33552 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS2P33552 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
CKS2P33552 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS2P33552 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.09□□□□□ -0.47
CKS2P33552 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CKS2P33552 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS2P33552 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
CKS2P33552 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CKS2P33552 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS2P33552 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS2P33552 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.09□□□□□ -0.47
CKS2P33552 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC12.09□□□□□ -0.47
CKS2P33552 AL359075.1-203ENST00000462729 1002 ntBASIC12.09□□□□□ -0.47
CKS2P33552 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC12.09□□□□□ -0.47
CKS2P33552 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC12.09□□□□□ -0.47
CKS2P33552 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC12.09□□□□□ -0.47
CKS2P33552 ITM2C-210ENST00000620962 501 ntBASIC12.09□□□□□ -0.47
CKS2P33552 AC010947.1-201ENST00000623454 693 ntBASIC12.09□□□□□ -0.47
CKS2P33552 AL023973.1-201ENST00000624619 620 ntBASIC12.09□□□□□ -0.47
CKS2P33552 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS2P33552 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CKS2P33552 SSR4P1-203ENST00000599569 2260 ntBASIC12.09□□□□□ -0.47
CKS2P33552 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms