Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.44■□□□□ 0.06
CTSBP07858 AJ011932.1-201ENST00000621707 465 ntBASIC15.44■□□□□ 0.06
CTSBP07858 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
CTSBP07858 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CTSBP07858 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.44■□□□□ 0.06
CTSBP07858 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CTSBP07858 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CTSBP07858 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CTSBP07858 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.44■□□□□ 0.06
CTSBP07858 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CTSBP07858 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.44■□□□□ 0.06
CTSBP07858 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CTSBP07858 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CTSBP07858 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.43■□□□□ 0.06
CTSBP07858 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.43■□□□□ 0.06
CTSBP07858 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CTSBP07858 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CTSBP07858 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CTSBP07858 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.43■□□□□ 0.06
CTSBP07858 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CTSBP07858 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CTSBP07858 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CTSBP07858 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.43■□□□□ 0.06
CTSBP07858 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.43■□□□□ 0.06
CTSBP07858 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.43■□□□□ 0.06
CTSBP07858 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CTSBP07858 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.43■□□□□ 0.06
CTSBP07858 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CTSBP07858 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.43■□□□□ 0.06
CTSBP07858 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.43■□□□□ 0.06
CTSBP07858 AC236430.1-201ENST00000402231 743 ntBASIC15.43■□□□□ 0.06
CTSBP07858 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CTSBP07858 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.43■□□□□ 0.06
CTSBP07858 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
CTSBP07858 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.43■□□□□ 0.06
CTSBP07858 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
CTSBP07858 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CTSBP07858 TSPY16P-201ENST00000449843 468 ntBASIC15.43■□□□□ 0.06
CTSBP07858 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.43■□□□□ 0.06
CTSBP07858 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.43■□□□□ 0.06
CTSBP07858 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CTSBP07858 HLA-V-204ENST00000476601 1289 ntBASIC15.43■□□□□ 0.06
CTSBP07858 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.43■□□□□ 0.06
CTSBP07858 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.43■□□□□ 0.06
CTSBP07858 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.43■□□□□ 0.06
CTSBP07858 RN7SL204P-201ENST00000582831 262 ntBASIC15.43■□□□□ 0.06
CTSBP07858 AL844908.2-201ENST00000609461 460 ntBASIC15.43■□□□□ 0.06
CTSBP07858 AL035456.1-201ENST00000456064 1369 ntBASIC15.43■□□□□ 0.06
CTSBP07858 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CTSBP07858 AC020916.1-201ENST00000587762 1774 ntBASIC15.43■□□□□ 0.06
CTSBP07858 CETN4P-206ENST00000642099 2168 ntBASIC15.43■□□□□ 0.06
CTSBP07858 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CTSBP07858 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CTSBP07858 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CTSBP07858 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CTSBP07858 LINC02199-201ENST00000506655 2702 ntBASIC15.43■□□□□ 0.06
CTSBP07858 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.43■□□□□ 0.06
CTSBP07858 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.43■□□□□ 0.06
CTSBP07858 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CTSBP07858 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSBP07858 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSBP07858 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
CTSBP07858 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSBP07858 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.42■□□□□ 0.06
CTSBP07858 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
CTSBP07858 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.42■□□□□ 0.06
CTSBP07858 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSBP07858 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.42■□□□□ 0.06
CTSBP07858 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CTSBP07858 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSBP07858 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CTSBP07858 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.42■□□□□ 0.06
CTSBP07858 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.42■□□□□ 0.06
CTSBP07858 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.42■□□□□ 0.06
CTSBP07858 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.42■□□□□ 0.06
CTSBP07858 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSBP07858 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.42■□□□□ 0.06
CTSBP07858 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSBP07858 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSBP07858 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.42■□□□□ 0.06
CTSBP07858 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.42■□□□□ 0.06
CTSBP07858 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.42■□□□□ 0.06
CTSBP07858 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CTSBP07858 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSBP07858 AC009407.1-201ENST00000568958 598 ntBASIC15.42■□□□□ 0.06
CTSBP07858 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.42■□□□□ 0.06
CTSBP07858 MIR4321-201ENST00000592276 80 ntBASIC15.42■□□□□ 0.06
CTSBP07858 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.42■□□□□ 0.06
CTSBP07858 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.42■□□□□ 0.06
CTSBP07858 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CTSBP07858 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.42■□□□□ 0.06
CTSBP07858 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSBP07858 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSBP07858 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CTSBP07858 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.41■□□□□ 0.06
CTSBP07858 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.41■□□□□ 0.06
CTSBP07858 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms