Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 AC041040.2-201ENST00000622926 2899 ntBASIC14.16□□□□□ -0.14
HLA-DQB1P01920 AL590787.1-201ENST00000568856 1315 ntBASIC14.16□□□□□ -0.14
HLA-DQB1P01920 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 AC211429.1-201ENST00000415277 523 ntBASIC14.16□□□□□ -0.14
HLA-DQB1P01920 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 AL136038.3-201ENST00000561909 1096 ntBASIC14.16□□□□□ -0.14
HLA-DQB1P01920 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 LINC01023-201ENST00000606054 436 ntBASIC14.16□□□□□ -0.14
HLA-DQB1P01920 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.16□□□□□ -0.14
HLA-DQB1P01920 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 AC008677.1-201ENST00000519230 1561 ntBASIC14.16□□□□□ -0.14
HLA-DQB1P01920 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HLA-DQB1P01920 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.15□□□□□ -0.14
HLA-DQB1P01920 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DQB1P01920 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DQB1P01920 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DQB1P01920 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.15□□□□□ -0.14
HLA-DQB1P01920 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HLA-DQB1P01920 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
HLA-DQB1P01920 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DQB1P01920 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DQB1P01920 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.15□□□□□ -0.14
HLA-DQB1P01920 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DQB1P01920 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
HLA-DQB1P01920 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DQB1P01920 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-DQB1P01920 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms