Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.54■□□□□ 0.08
CLPTM1O96005 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.54■□□□□ 0.08
CLPTM1O96005 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLPTM1O96005 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.54■□□□□ 0.08
CLPTM1O96005 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLPTM1O96005 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.54■□□□□ 0.08
CLPTM1O96005 AC002310.6-201ENST00000624451 1377 ntBASIC15.54■□□□□ 0.08
CLPTM1O96005 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CLPTM1O96005 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLPTM1O96005 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLPTM1O96005 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.54■□□□□ 0.08
CLPTM1O96005 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.54■□□□□ 0.08
CLPTM1O96005 AC113404.2-201ENST00000507884 177 ntBASIC15.54■□□□□ 0.08
CLPTM1O96005 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.54■□□□□ 0.08
CLPTM1O96005 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.54■□□□□ 0.08
CLPTM1O96005 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.54■□□□□ 0.08
CLPTM1O96005 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CLPTM1O96005 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.54■□□□□ 0.08
CLPTM1O96005 C8orf49-201ENST00000525043 1968 ntBASIC15.54■□□□□ 0.08
CLPTM1O96005 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLPTM1O96005 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLPTM1O96005 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLPTM1O96005 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLPTM1O96005 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLPTM1O96005 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLPTM1O96005 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLPTM1O96005 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLPTM1O96005 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLPTM1O96005 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.54■□□□□ 0.08
CLPTM1O96005 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.53■□□□□ 0.08
CLPTM1O96005 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLPTM1O96005 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLPTM1O96005 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.53■□□□□ 0.08
CLPTM1O96005 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLPTM1O96005 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLPTM1O96005 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CLPTM1O96005 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLPTM1O96005 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CLPTM1O96005 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.53■□□□□ 0.08
CLPTM1O96005 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.53■□□□□ 0.08
CLPTM1O96005 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.53■□□□□ 0.08
CLPTM1O96005 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLPTM1O96005 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLPTM1O96005 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.53■□□□□ 0.08
CLPTM1O96005 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLPTM1O96005 AC092119.3-201ENST00000612618 583 ntBASIC15.53■□□□□ 0.08
CLPTM1O96005 IGHV3-41-201ENST00000613121 348 ntBASIC15.53■□□□□ 0.08
CLPTM1O96005 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CLPTM1O96005 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.53■□□□□ 0.08
CLPTM1O96005 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.53■□□□□ 0.08
CLPTM1O96005 LINC00528-201ENST00000600723 2160 ntBASIC15.53■□□□□ 0.08
CLPTM1O96005 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLPTM1O96005 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLPTM1O96005 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.53■□□□□ 0.08
CLPTM1O96005 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLPTM1O96005 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CLPTM1O96005 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLPTM1O96005 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLPTM1O96005 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CLPTM1O96005 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CLPTM1O96005 AC112504.1-201ENST00000623415 1841 ntBASIC15.52■□□□□ 0.08
CLPTM1O96005 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLPTM1O96005 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLPTM1O96005 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLPTM1O96005 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.52■□□□□ 0.08
CLPTM1O96005 AL109954.1-202ENST00000564051 2148 ntBASIC15.52■□□□□ 0.08
CLPTM1O96005 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLPTM1O96005 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.52■□□□□ 0.08
CLPTM1O96005 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLPTM1O96005 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.52■□□□□ 0.08
CLPTM1O96005 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.52■□□□□ 0.08
CLPTM1O96005 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
CLPTM1O96005 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLPTM1O96005 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLPTM1O96005 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.52■□□□□ 0.08
CLPTM1O96005 CHCHD2P8-201ENST00000429873 447 ntBASIC15.52■□□□□ 0.08
CLPTM1O96005 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.52■□□□□ 0.08
CLPTM1O96005 AP002383.4-201ENST00000442518 975 ntBASIC15.52■□□□□ 0.08
CLPTM1O96005 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.52■□□□□ 0.08
CLPTM1O96005 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLPTM1O96005 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.52■□□□□ 0.08
CLPTM1O96005 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.52■□□□□ 0.08
CLPTM1O96005 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CLPTM1O96005 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.52■□□□□ 0.08
CLPTM1O96005 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CLPTM1O96005 NPAP1P7-201ENST00000613027 823 ntBASIC15.52■□□□□ 0.08
CLPTM1O96005 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLPTM1O96005 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLPTM1O96005 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLPTM1O96005 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLPTM1O96005 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.52■□□□□ 0.07
CLPTM1O96005 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLPTM1O96005 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLPTM1O96005 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLPTM1O96005 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.52■□□□□ 0.07
CLPTM1O96005 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLPTM1O96005 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLPTM1O96005 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CLPTM1O96005 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLPTM1O96005 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms