Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.1■□□□□ 0.17
CPNE6O95741 INGX-202ENST00000489074 768 ntBASIC16.1■□□□□ 0.17
CPNE6O95741 SLC25A39P2-201ENST00000537614 270 ntBASIC16.1■□□□□ 0.17
CPNE6O95741 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.1■□□□□ 0.17
CPNE6O95741 AC140878.1-201ENST00000565277 250 ntBASIC16.1■□□□□ 0.17
CPNE6O95741 AP000842.3-202ENST00000569238 1080 ntBASIC16.1■□□□□ 0.17
CPNE6O95741 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CPNE6O95741 MIR4745-201ENST00000577608 62 ntBASIC16.1■□□□□ 0.17
CPNE6O95741 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.1■□□□□ 0.17
CPNE6O95741 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE6O95741 CYP2A7P1-201ENST00000595391 815 ntBASIC16.1■□□□□ 0.17
CPNE6O95741 AC021097.1-201ENST00000607902 574 ntBASIC16.1■□□□□ 0.17
CPNE6O95741 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.1■□□□□ 0.17
CPNE6O95741 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CPNE6O95741 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.1■□□□□ 0.17
CPNE6O95741 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CPNE6O95741 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE6O95741 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE6O95741 AC016027.1-202ENST00000607927 1699 ntBASIC16.1■□□□□ 0.17
CPNE6O95741 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.1■□□□□ 0.17
CPNE6O95741 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE6O95741 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE6O95741 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.1■□□□□ 0.17
CPNE6O95741 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.1■□□□□ 0.17
CPNE6O95741 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CPNE6O95741 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE6O95741 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.1■□□□□ 0.17
CPNE6O95741 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE6O95741 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CPNE6O95741 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE6O95741 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE6O95741 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE6O95741 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE6O95741 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.09■□□□□ 0.17
CPNE6O95741 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.09■□□□□ 0.17
CPNE6O95741 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE6O95741 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE6O95741 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CPNE6O95741 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CPNE6O95741 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE6O95741 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
CPNE6O95741 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE6O95741 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.09■□□□□ 0.17
CPNE6O95741 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE6O95741 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE6O95741 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE6O95741 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE6O95741 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE6O95741 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE6O95741 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE6O95741 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
CPNE6O95741 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE6O95741 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE6O95741 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.09■□□□□ 0.17
CPNE6O95741 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE6O95741 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE6O95741 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.09■□□□□ 0.17
CPNE6O95741 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CPNE6O95741 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE6O95741 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.09■□□□□ 0.17
CPNE6O95741 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.09■□□□□ 0.17
CPNE6O95741 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.09■□□□□ 0.17
CPNE6O95741 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.09■□□□□ 0.17
CPNE6O95741 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE6O95741 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE6O95741 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CPNE6O95741 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CPNE6O95741 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE6O95741 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE6O95741 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CPNE6O95741 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE6O95741 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE6O95741 AC008677.1-201ENST00000519230 1561 ntBASIC16.09■□□□□ 0.17
CPNE6O95741 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE6O95741 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE6O95741 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
CPNE6O95741 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
CPNE6O95741 RNF216P1-203ENST00000404404 2427 ntBASIC16.08■□□□□ 0.17
CPNE6O95741 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE6O95741 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE6O95741 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE6O95741 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE6O95741 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE6O95741 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE6O95741 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE6O95741 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE6O95741 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE6O95741 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE6O95741 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE6O95741 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE6O95741 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE6O95741 MIR346-201ENST00000362234 95 ntBASIC16.08■□□□□ 0.16
CPNE6O95741 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE6O95741 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE6O95741 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.08■□□□□ 0.16
CPNE6O95741 AL035633.1-201ENST00000406139 838 ntBASIC16.08■□□□□ 0.16
CPNE6O95741 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.08■□□□□ 0.16
CPNE6O95741 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE6O95741 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.08■□□□□ 0.16
CPNE6O95741 ALG1L8P-201ENST00000533887 760 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms