Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.6□□□□□ -0.07
CNOT4O95628 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT4O95628 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT4O95628 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.6□□□□□ -0.07
CNOT4O95628 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT4O95628 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CNOT4O95628 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT4O95628 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT4O95628 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT4O95628 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT4O95628 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT4O95628 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT4O95628 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CNOT4O95628 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT4O95628 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT4O95628 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.59□□□□□ -0.07
CNOT4O95628 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
CNOT4O95628 AL671710.1-201ENST00000610245 2349 ntBASIC14.59□□□□□ -0.07
CNOT4O95628 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT4O95628 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT4O95628 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT4O95628 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT4O95628 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT4O95628 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT4O95628 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT4O95628 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.59□□□□□ -0.07
CNOT4O95628 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT4O95628 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT4O95628 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
CNOT4O95628 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT4O95628 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.59□□□□□ -0.07
CNOT4O95628 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.59□□□□□ -0.07
CNOT4O95628 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.59□□□□□ -0.07
CNOT4O95628 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.59□□□□□ -0.07
CNOT4O95628 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.59□□□□□ -0.07
CNOT4O95628 AC005237.2-201ENST00000434368 219 ntBASIC14.59□□□□□ -0.07
CNOT4O95628 SPCS2P4-201ENST00000436160 681 ntBASIC14.59□□□□□ -0.07
CNOT4O95628 BCRP1-201ENST00000444246 691 ntBASIC14.59□□□□□ -0.07
CNOT4O95628 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT4O95628 AC105233.2-201ENST00000523697 349 ntBASIC14.59□□□□□ -0.07
CNOT4O95628 AF228730.5-201ENST00000530288 346 ntBASIC14.59□□□□□ -0.07
CNOT4O95628 AC025678.2-201ENST00000562061 970 ntBASIC14.59□□□□□ -0.07
CNOT4O95628 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.59□□□□□ -0.07
CNOT4O95628 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.59□□□□□ -0.07
CNOT4O95628 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.59□□□□□ -0.07
CNOT4O95628 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.59□□□□□ -0.07
CNOT4O95628 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.59□□□□□ -0.07
CNOT4O95628 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT4O95628 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT4O95628 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CNOT4O95628 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT4O95628 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.59□□□□□ -0.07
CNOT4O95628 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT4O95628 AL118508.1-201ENST00000613502 2345 ntBASIC14.59□□□□□ -0.07
CNOT4O95628 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CNOT4O95628 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CNOT4O95628 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT4O95628 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.59□□□□□ -0.07
CNOT4O95628 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT4O95628 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT4O95628 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CNOT4O95628 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.58□□□□□ -0.07
CNOT4O95628 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
CNOT4O95628 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CNOT4O95628 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT4O95628 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT4O95628 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT4O95628 AC046158.3-201ENST00000624947 2558 ntBASIC14.58□□□□□ -0.08
CNOT4O95628 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CNOT4O95628 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.58□□□□□ -0.08
CNOT4O95628 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT4O95628 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT4O95628 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT4O95628 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CNOT4O95628 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CNOT4O95628 MIR346-201ENST00000362234 95 ntBASIC14.58□□□□□ -0.08
CNOT4O95628 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT4O95628 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.58□□□□□ -0.08
CNOT4O95628 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.58□□□□□ -0.08
CNOT4O95628 HLA-J-203ENST00000494367 1087 ntBASIC14.58□□□□□ -0.08
CNOT4O95628 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.58□□□□□ -0.08
CNOT4O95628 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.58□□□□□ -0.08
CNOT4O95628 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.58□□□□□ -0.08
CNOT4O95628 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.58□□□□□ -0.08
CNOT4O95628 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.58□□□□□ -0.08
CNOT4O95628 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CNOT4O95628 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT4O95628 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CNOT4O95628 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.58□□□□□ -0.08
CNOT4O95628 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT4O95628 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT4O95628 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT4O95628 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.58□□□□□ -0.08
CNOT4O95628 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT4O95628 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CNOT4O95628 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT4O95628 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT4O95628 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.58□□□□□ -0.08
CNOT4O95628 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.58□□□□□ -0.08
CNOT4O95628 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms