Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PFDN6O15212 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.46■□□□□ 0.23
PFDN6O15212 AL513523.2-202ENST00000427283 2040 ntBASIC16.46■□□□□ 0.23
PFDN6O15212 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PFDN6O15212 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PFDN6O15212 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PFDN6O15212 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
PFDN6O15212 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
PFDN6O15212 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.46■□□□□ 0.22
PFDN6O15212 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
PFDN6O15212 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.46■□□□□ 0.22
PFDN6O15212 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PFDN6O15212 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
PFDN6O15212 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.45■□□□□ 0.22
PFDN6O15212 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.45■□□□□ 0.22
PFDN6O15212 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PFDN6O15212 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PFDN6O15212 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.45■□□□□ 0.22
PFDN6O15212 AL590627.1-203ENST00000421194 1026 ntBASIC16.45■□□□□ 0.22
PFDN6O15212 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 AL591424.1-201ENST00000442569 1213 ntBASIC16.45■□□□□ 0.22
PFDN6O15212 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.45■□□□□ 0.22
PFDN6O15212 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.45■□□□□ 0.22
PFDN6O15212 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.45■□□□□ 0.22
PFDN6O15212 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PFDN6O15212 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 AC064836.3-201ENST00000607928 673 ntBASIC16.45■□□□□ 0.22
PFDN6O15212 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.45■□□□□ 0.22
PFDN6O15212 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.45■□□□□ 0.22
PFDN6O15212 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PFDN6O15212 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PFDN6O15212 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.45■□□□□ 0.22
PFDN6O15212 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
PFDN6O15212 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
PFDN6O15212 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN6O15212 IL9RP2-201ENST00000423948 1312 ntBASIC16.45■□□□□ 0.22
PFDN6O15212 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.44■□□□□ 0.22
PFDN6O15212 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PFDN6O15212 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN6O15212 U82695.1-201ENST00000635752 1889 ntBASIC16.44■□□□□ 0.22
PFDN6O15212 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.44■□□□□ 0.22
PFDN6O15212 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.44■□□□□ 0.22
PFDN6O15212 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN6O15212 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.44■□□□□ 0.22
PFDN6O15212 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
PFDN6O15212 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN6O15212 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN6O15212 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN6O15212 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN6O15212 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.44■□□□□ 0.22
PFDN6O15212 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.44■□□□□ 0.22
PFDN6O15212 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.44■□□□□ 0.22
PFDN6O15212 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.44■□□□□ 0.22
PFDN6O15212 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN6O15212 KRT18P34-201ENST00000488218 1270 ntBASIC16.44■□□□□ 0.22
PFDN6O15212 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.44■□□□□ 0.22
PFDN6O15212 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.44■□□□□ 0.22
PFDN6O15212 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.44■□□□□ 0.22
PFDN6O15212 RNA5SP416-201ENST00000516838 111 ntBASIC16.44■□□□□ 0.22
PFDN6O15212 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.44■□□□□ 0.22
PFDN6O15212 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.44■□□□□ 0.22
PFDN6O15212 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.44■□□□□ 0.22
PFDN6O15212 AC034105.1-201ENST00000563488 319 ntBASIC16.44■□□□□ 0.22
PFDN6O15212 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PFDN6O15212 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.44■□□□□ 0.22
PFDN6O15212 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.44■□□□□ 0.22
PFDN6O15212 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.44■□□□□ 0.22
PFDN6O15212 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PFDN6O15212 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN6O15212 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN6O15212 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN6O15212 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.44■□□□□ 0.22
PFDN6O15212 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN6O15212 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms