Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.41■□□□□ 0.06
KPNA4O00629 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KPNA4O00629 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KPNA4O00629 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KPNA4O00629 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
KPNA4O00629 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KPNA4O00629 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KPNA4O00629 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.41■□□□□ 0.06
KPNA4O00629 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KPNA4O00629 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.41■□□□□ 0.06
KPNA4O00629 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.41■□□□□ 0.06
KPNA4O00629 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KPNA4O00629 AP002414.2-201ENST00000591780 3365 ntBASIC15.41■□□□□ 0.06
KPNA4O00629 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KPNA4O00629 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
KPNA4O00629 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KPNA4O00629 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.4■□□□□ 0.06
KPNA4O00629 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
KPNA4O00629 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
KPNA4O00629 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.4■□□□□ 0.06
KPNA4O00629 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.4■□□□□ 0.06
KPNA4O00629 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.4■□□□□ 0.06
KPNA4O00629 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.4■□□□□ 0.06
KPNA4O00629 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.4■□□□□ 0.06
KPNA4O00629 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.4■□□□□ 0.06
KPNA4O00629 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.4■□□□□ 0.06
KPNA4O00629 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.4■□□□□ 0.06
KPNA4O00629 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.4■□□□□ 0.06
KPNA4O00629 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.4■□□□□ 0.06
KPNA4O00629 TERC-201ENST00000602385 541 ntBASIC15.4■□□□□ 0.06
KPNA4O00629 AC008608.2-201ENST00000606089 416 ntBASIC15.4■□□□□ 0.06
KPNA4O00629 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.4■□□□□ 0.06
KPNA4O00629 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
KPNA4O00629 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 CICP4-201ENST00000447359 2812 ntBASIC15.4■□□□□ 0.06
KPNA4O00629 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.4■□□□□ 0.06
KPNA4O00629 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.4■□□□□ 0.06
KPNA4O00629 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
KPNA4O00629 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
KPNA4O00629 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
KPNA4O00629 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.4■□□□□ 0.06
KPNA4O00629 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
KPNA4O00629 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
KPNA4O00629 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.4■□□□□ 0.06
KPNA4O00629 AC007326.2-201ENST00000624224 7579 ntBASIC15.4■□□□□ 0.06
KPNA4O00629 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KPNA4O00629 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.39■□□□□ 0.05
KPNA4O00629 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
KPNA4O00629 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.39■□□□□ 0.05
KPNA4O00629 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KPNA4O00629 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
KPNA4O00629 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KPNA4O00629 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KPNA4O00629 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.39■□□□□ 0.05
KPNA4O00629 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KPNA4O00629 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KPNA4O00629 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.39■□□□□ 0.05
KPNA4O00629 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KPNA4O00629 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KPNA4O00629 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KPNA4O00629 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.39■□□□□ 0.05
KPNA4O00629 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KPNA4O00629 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
KPNA4O00629 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KPNA4O00629 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.39■□□□□ 0.05
KPNA4O00629 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.39■□□□□ 0.05
KPNA4O00629 PRYP5-201ENST00000451909 266 ntBASIC15.39■□□□□ 0.05
KPNA4O00629 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
KPNA4O00629 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.39■□□□□ 0.05
KPNA4O00629 SART3-203ENST00000546611 1184 ntBASIC15.39■□□□□ 0.05
KPNA4O00629 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KPNA4O00629 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms