Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF304Q9HCX3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF304Q9HCX3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF304Q9HCX3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF304Q9HCX3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF304Q9HCX3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
ZNF304Q9HCX3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF304Q9HCX3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF304Q9HCX3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF304Q9HCX3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.6■□□□□ 0.09
ZNF304Q9HCX3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF304Q9HCX3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF304Q9HCX3 AL031731.1-201ENST00000642131 2094 ntBASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 GPAA1P2-202ENST00000606848 1787 ntBASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 AL122018.1-201ENST00000446607 2310 ntBASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 SPDYE7P-202ENST00000420373 878 ntBASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 CNN2P2-201ENST00000443536 909 ntBASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 CNN2P3-201ENST00000450201 906 ntBASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 AC067863.1-201ENST00000494933 530 ntBASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 AC069262.1-201ENST00000539058 672 ntBASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 AL355385.1-201ENST00000606123 409 ntBASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 AL136317.3-201ENST00000618497 906 ntBASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF304Q9HCX3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
ZNF304Q9HCX3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.58■□□□□ 0.09
ZNF304Q9HCX3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ZNF304Q9HCX3 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ZNF304Q9HCX3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ZNF304Q9HCX3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
ZNF304Q9HCX3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.58■□□□□ 0.09
ZNF304Q9HCX3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
ZNF304Q9HCX3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
ZNF304Q9HCX3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
ZNF304Q9HCX3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 AC142381.1-201ENST00000426099 345 ntBASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 SPDYE14P-201ENST00000442619 822 ntBASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
ZNF304Q9HCX3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms