Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.21■□□□□ 0.03
POLR2J3Q9H1A7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
POLR2J3Q9H1A7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.21■□□□□ 0.03
POLR2J3Q9H1A7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.21■□□□□ 0.03
POLR2J3Q9H1A7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
POLR2J3Q9H1A7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.21■□□□□ 0.03
POLR2J3Q9H1A7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.21■□□□□ 0.03
POLR2J3Q9H1A7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.21■□□□□ 0.03
POLR2J3Q9H1A7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
POLR2J3Q9H1A7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.21■□□□□ 0.03
POLR2J3Q9H1A7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
POLR2J3Q9H1A7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.21■□□□□ 0.03
POLR2J3Q9H1A7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
POLR2J3Q9H1A7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
POLR2J3Q9H1A7 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
POLR2J3Q9H1A7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
POLR2J3Q9H1A7 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
POLR2J3Q9H1A7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
POLR2J3Q9H1A7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
POLR2J3Q9H1A7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.21■□□□□ 0.03
POLR2J3Q9H1A7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
POLR2J3Q9H1A7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
POLR2J3Q9H1A7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
POLR2J3Q9H1A7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
POLR2J3Q9H1A7 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.21■□□□□ 0.02
POLR2J3Q9H1A7 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.21■□□□□ 0.02
POLR2J3Q9H1A7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
POLR2J3Q9H1A7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 AC008735.5-201ENST00000623544 497 ntBASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 AC104640.1-201ENST00000562617 2109 ntBASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
POLR2J3Q9H1A7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 RPS2P28-201ENST00000314255 741 ntBASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 MIR3909-201ENST00000579518 119 ntBASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms