Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC105020.1-201ENST00000435356 2205 ntBASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 CNN2P2-201ENST00000443536 909 ntBASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 CNN2P3-201ENST00000450201 906 ntBASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 HLA-J-202ENST00000469281 1241 ntBASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 SLC25A39P2-201ENST00000537614 270 ntBASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 AL136317.3-201ENST00000618497 906 ntBASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 AC084121.4-201ENST00000641598 221 ntBASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 AF228730.8-201ENST00000642140 221 ntBASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP3Q9BWW4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSBP3Q9BWW4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SSBP3Q9BWW4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSBP3Q9BWW4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.22
SSBP3Q9BWW4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSBP3Q9BWW4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSBP3Q9BWW4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSBP3Q9BWW4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
SSBP3Q9BWW4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSBP3Q9BWW4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 CYMP-203ENST00000474680 1263 ntBASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 AC067863.1-201ENST00000494933 530 ntBASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 AL355385.1-201ENST00000606123 409 ntBASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 AC020765.3-201ENST00000613051 740 ntBASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 AP001059.3-201ENST00000619053 235 ntBASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP3Q9BWW4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.69□□□□□ -0.22
SSBP3Q9BWW4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms