Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
RNF183Q96D59 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF183Q96D59 LINC02012-201ENST00000608206 1725 ntBASIC12.23□□□□□ -0.45
RNF183Q96D59 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
RNF183Q96D59 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC12.22□□□□□ -0.45
RNF183Q96D59 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC12.22□□□□□ -0.45
RNF183Q96D59 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.22□□□□□ -0.45
RNF183Q96D59 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.22□□□□□ -0.45
RNF183Q96D59 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
RNF183Q96D59 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
RNF183Q96D59 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 CICP14-201ENST00000629111 2732 ntBASIC12.22□□□□□ -0.45
RNF183Q96D59 AKAP8P1-201ENST00000434743 1349 ntBASIC12.22□□□□□ -0.45
RNF183Q96D59 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 AC004461.1-201ENST00000412461 403 ntBASIC12.22□□□□□ -0.45
RNF183Q96D59 PON3-203ENST00000427422 894 ntTSL 3 BASIC12.22□□□□□ -0.45
RNF183Q96D59 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 TIMM8BP1-201ENST00000452384 211 ntBASIC12.22□□□□□ -0.45
RNF183Q96D59 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 RN7SL589P-201ENST00000481268 310 ntBASIC12.22□□□□□ -0.45
RNF183Q96D59 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.22□□□□□ -0.45
RNF183Q96D59 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.22□□□□□ -0.45
RNF183Q96D59 MPDU1-223ENST00000582151 728 ntBASIC12.22□□□□□ -0.45
RNF183Q96D59 AC022145.2-201ENST00000598203 171 ntBASIC12.22□□□□□ -0.45
RNF183Q96D59 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.22□□□□□ -0.45
RNF183Q96D59 AL009183.1-201ENST00000603760 355 ntBASIC12.22□□□□□ -0.45
RNF183Q96D59 AC099522.2-201ENST00000607001 744 ntBASIC12.22□□□□□ -0.45
RNF183Q96D59 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
RNF183Q96D59 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
RNF183Q96D59 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
RNF183Q96D59 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.22□□□□□ -0.45
RNF183Q96D59 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.22□□□□□ -0.45
RNF183Q96D59 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.22□□□□□ -0.45
RNF183Q96D59 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.22□□□□□ -0.45
RNF183Q96D59 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.22□□□□□ -0.45
RNF183Q96D59 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF183Q96D59 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC12.22□□□□□ -0.45
RNF183Q96D59 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RNF183Q96D59 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RNF183Q96D59 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RNF183Q96D59 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.21□□□□□ -0.45
RNF183Q96D59 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RNF183Q96D59 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
RNF183Q96D59 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC12.21□□□□□ -0.45
RNF183Q96D59 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.21□□□□□ -0.45
RNF183Q96D59 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
RNF183Q96D59 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.21□□□□□ -0.45
RNF183Q96D59 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RNF183Q96D59 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC12.21□□□□□ -0.45
RNF183Q96D59 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RNF183Q96D59 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RNF183Q96D59 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.21□□□□□ -0.45
RNF183Q96D59 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.21□□□□□ -0.45
RNF183Q96D59 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RNF183Q96D59 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC12.21□□□□□ -0.45
RNF183Q96D59 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RNF183Q96D59 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RNF183Q96D59 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RNF183Q96D59 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
RNF183Q96D59 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RNF183Q96D59 AC131009.4-201ENST00000624048 1740 ntBASIC12.21□□□□□ -0.45
RNF183Q96D59 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RNF183Q96D59 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RNF183Q96D59 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RNF183Q96D59 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.21□□□□□ -0.45
RNF183Q96D59 PMS2P4-201ENST00000412466 1052 ntBASIC12.21□□□□□ -0.45
RNF183Q96D59 ADH5P3-201ENST00000433842 1137 ntBASIC12.21□□□□□ -0.45
RNF183Q96D59 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.21□□□□□ -0.45
RNF183Q96D59 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
RNF183Q96D59 AC109635.5-201ENST00000533593 962 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms