Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB3P54284 GGT3P-204ENST00000453783 1664 ntBASIC19.28■□□□□ 0.68
CACNB3P54284 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.28■□□□□ 0.68
CACNB3P54284 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB3P54284 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB3P54284 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB3P54284 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.28■□□□□ 0.68
CACNB3P54284 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.28■□□□□ 0.68
CACNB3P54284 ACA64.2-201ENST00000459014 129 ntBASIC19.28■□□□□ 0.68
CACNB3P54284 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB3P54284 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB3P54284 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CACNB3P54284 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB3P54284 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB3P54284 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB3P54284 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB3P54284 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.28■□□□□ 0.68
CACNB3P54284 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC19.28■□□□□ 0.68
CACNB3P54284 CYP4F24P-201ENST00000586049 1580 ntBASIC19.27■□□□□ 0.68
CACNB3P54284 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CACNB3P54284 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CACNB3P54284 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.27■□□□□ 0.68
CACNB3P54284 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.27■□□□□ 0.68
CACNB3P54284 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CACNB3P54284 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CACNB3P54284 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CACNB3P54284 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CACNB3P54284 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC19.27■□□□□ 0.68
CACNB3P54284 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.27■□□□□ 0.68
CACNB3P54284 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CACNB3P54284 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.27■□□□□ 0.68
CACNB3P54284 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CACNB3P54284 MIR1909-201ENST00000411312 80 ntBASIC19.27■□□□□ 0.68
CACNB3P54284 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19.27■□□□□ 0.68
CACNB3P54284 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.27■□□□□ 0.68
CACNB3P54284 AC011495.1-201ENST00000498085 584 ntBASIC19.27■□□□□ 0.68
CACNB3P54284 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.27■□□□□ 0.68
CACNB3P54284 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CACNB3P54284 AC025048.3-201ENST00000590609 569 ntBASIC19.27■□□□□ 0.68
CACNB3P54284 MIR8072-201ENST00000614241 80 ntBASIC19.27■□□□□ 0.68
CACNB3P54284 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.27■□□□□ 0.68
CACNB3P54284 AC005702.4-201ENST00000618393 416 ntBASIC19.27■□□□□ 0.68
CACNB3P54284 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CACNB3P54284 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CACNB3P54284 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.27■□□□□ 0.68
CACNB3P54284 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CACNB3P54284 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CACNB3P54284 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CACNB3P54284 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.27■□□□□ 0.67
CACNB3P54284 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CACNB3P54284 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CACNB3P54284 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNB3P54284 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNB3P54284 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNB3P54284 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNB3P54284 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNB3P54284 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNB3P54284 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CACNB3P54284 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CACNB3P54284 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNB3P54284 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CACNB3P54284 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CACNB3P54284 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.26■□□□□ 0.67
CACNB3P54284 KRT17P8-201ENST00000540749 863 ntBASIC19.26■□□□□ 0.67
CACNB3P54284 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNB3P54284 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNB3P54284 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.26■□□□□ 0.67
CACNB3P54284 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.26■□□□□ 0.67
CACNB3P54284 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CACNB3P54284 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNB3P54284 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CACNB3P54284 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.26■□□□□ 0.67
CACNB3P54284 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNB3P54284 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNB3P54284 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNB3P54284 AC009053.2-201ENST00000563701 2365 ntBASIC19.26■□□□□ 0.67
CACNB3P54284 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNB3P54284 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNB3P54284 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CACNB3P54284 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNB3P54284 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.25■□□□□ 0.67
CACNB3P54284 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.25■□□□□ 0.67
CACNB3P54284 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNB3P54284 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CACNB3P54284 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNB3P54284 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNB3P54284 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNB3P54284 HLA-A-202ENST00000376806 1854 ntBASIC19.25■□□□□ 0.67
CACNB3P54284 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNB3P54284 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CACNB3P54284 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.25■□□□□ 0.67
CACNB3P54284 TTTY23B-201ENST00000442790 549 ntBASIC19.25■□□□□ 0.67
CACNB3P54284 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.25■□□□□ 0.67
CACNB3P54284 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.25■□□□□ 0.67
CACNB3P54284 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.25■□□□□ 0.67
CACNB3P54284 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNB3P54284 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.25■□□□□ 0.67
CACNB3P54284 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.25■□□□□ 0.67
CACNB3P54284 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNB3P54284 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms