Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIMK2P53671 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LIMK2P53671 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIMK2P53671 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.56■□□□□ 0.24
LIMK2P53671 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LIMK2P53671 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.56■□□□□ 0.24
LIMK2P53671 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIMK2P53671 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.55■□□□□ 0.24
LIMK2P53671 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LIMK2P53671 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LIMK2P53671 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.55■□□□□ 0.24
LIMK2P53671 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.55■□□□□ 0.24
LIMK2P53671 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LIMK2P53671 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LIMK2P53671 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.55■□□□□ 0.24
LIMK2P53671 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
LIMK2P53671 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.55■□□□□ 0.24
LIMK2P53671 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.55■□□□□ 0.24
LIMK2P53671 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LIMK2P53671 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.55■□□□□ 0.24
LIMK2P53671 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.55■□□□□ 0.24
LIMK2P53671 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.55■□□□□ 0.24
LIMK2P53671 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.55■□□□□ 0.24
LIMK2P53671 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LIMK2P53671 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.55■□□□□ 0.24
LIMK2P53671 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
LIMK2P53671 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LIMK2P53671 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LIMK2P53671 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LIMK2P53671 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LIMK2P53671 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LIMK2P53671 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LIMK2P53671 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LIMK2P53671 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LIMK2P53671 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
LIMK2P53671 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LIMK2P53671 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LIMK2P53671 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LIMK2P53671 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.54■□□□□ 0.24
LIMK2P53671 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LIMK2P53671 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LIMK2P53671 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LIMK2P53671 AC025580.3-201ENST00000617932 1424 ntBASIC16.54■□□□□ 0.24
LIMK2P53671 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LIMK2P53671 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LIMK2P53671 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LIMK2P53671 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LIMK2P53671 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LIMK2P53671 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
LIMK2P53671 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LIMK2P53671 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.54■□□□□ 0.24
LIMK2P53671 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
LIMK2P53671 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.54■□□□□ 0.24
LIMK2P53671 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.54■□□□□ 0.24
LIMK2P53671 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LIMK2P53671 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LIMK2P53671 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.54■□□□□ 0.24
LIMK2P53671 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LIMK2P53671 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LIMK2P53671 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LIMK2P53671 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LIMK2P53671 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LIMK2P53671 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.54■□□□□ 0.24
LIMK2P53671 CEND1P1-201ENST00000451006 455 ntBASIC16.54■□□□□ 0.24
LIMK2P53671 AC074386.1-202ENST00000463561 864 ntBASIC16.54■□□□□ 0.24
LIMK2P53671 CXCL1P1-201ENST00000502804 216 ntBASIC16.54■□□□□ 0.24
LIMK2P53671 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
LIMK2P53671 AC027796.2-201ENST00000575326 344 ntBASIC16.54■□□□□ 0.24
LIMK2P53671 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LIMK2P53671 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LIMK2P53671 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.54■□□□□ 0.24
LIMK2P53671 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LIMK2P53671 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LIMK2P53671 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
LIMK2P53671 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LIMK2P53671 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LIMK2P53671 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.54■□□□□ 0.24
LIMK2P53671 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
LIMK2P53671 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.54■□□□□ 0.24
LIMK2P53671 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
LIMK2P53671 AC010491.1-201ENST00000563101 2797 ntBASIC16.54■□□□□ 0.24
LIMK2P53671 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LIMK2P53671 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LIMK2P53671 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LIMK2P53671 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.53■□□□□ 0.24
LIMK2P53671 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.53■□□□□ 0.24
LIMK2P53671 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LIMK2P53671 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
LIMK2P53671 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LIMK2P53671 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LIMK2P53671 KRT18P28-201ENST00000453838 1332 ntBASIC16.53■□□□□ 0.24
LIMK2P53671 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LIMK2P53671 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LIMK2P53671 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LIMK2P53671 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LIMK2P53671 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LIMK2P53671 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LIMK2P53671 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.53■□□□□ 0.24
LIMK2P53671 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
LIMK2P53671 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms