Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.91■□□□□ 0.14
PDX1P52945 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.91■□□□□ 0.14
PDX1P52945 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.91■□□□□ 0.14
PDX1P52945 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.9■□□□□ 0.14
PDX1P52945 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDX1P52945 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PDX1P52945 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDX1P52945 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.9■□□□□ 0.14
PDX1P52945 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PDX1P52945 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.9■□□□□ 0.14
PDX1P52945 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PDX1P52945 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PDX1P52945 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDX1P52945 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.9■□□□□ 0.14
PDX1P52945 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.9■□□□□ 0.14
PDX1P52945 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDX1P52945 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.9■□□□□ 0.14
PDX1P52945 PIN1P1-201ENST00000412108 996 ntBASIC15.9■□□□□ 0.14
PDX1P52945 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.9■□□□□ 0.14
PDX1P52945 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDX1P52945 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDX1P52945 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDX1P52945 HLA-V-204ENST00000476601 1289 ntBASIC15.9■□□□□ 0.14
PDX1P52945 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.9■□□□□ 0.14
PDX1P52945 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.9■□□□□ 0.14
PDX1P52945 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.9■□□□□ 0.14
PDX1P52945 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.9■□□□□ 0.14
PDX1P52945 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.9■□□□□ 0.14
PDX1P52945 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.9■□□□□ 0.14
PDX1P52945 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.9■□□□□ 0.14
PDX1P52945 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.9■□□□□ 0.14
PDX1P52945 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDX1P52945 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.9■□□□□ 0.14
PDX1P52945 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.9■□□□□ 0.14
PDX1P52945 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDX1P52945 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PDX1P52945 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
PDX1P52945 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PDX1P52945 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.9■□□□□ 0.14
PDX1P52945 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDX1P52945 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
PDX1P52945 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
PDX1P52945 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.89■□□□□ 0.14
PDX1P52945 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
PDX1P52945 AC078925.2-201ENST00000624013 1973 ntBASIC15.89■□□□□ 0.13
PDX1P52945 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PDX1P52945 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDX1P52945 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDX1P52945 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDX1P52945 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDX1P52945 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.89■□□□□ 0.13
PDX1P52945 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDX1P52945 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.89■□□□□ 0.13
PDX1P52945 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDX1P52945 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDX1P52945 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDX1P52945 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.89■□□□□ 0.13
PDX1P52945 AC009477.1-201ENST00000452936 217 ntBASIC15.89■□□□□ 0.13
PDX1P52945 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.89■□□□□ 0.13
PDX1P52945 MEIS3P1-201ENST00000495167 958 ntBASIC15.89■□□□□ 0.13
PDX1P52945 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.89■□□□□ 0.13
PDX1P52945 PRYP6-201ENST00000514804 343 ntBASIC15.89■□□□□ 0.13
PDX1P52945 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.89■□□□□ 0.13
PDX1P52945 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.89■□□□□ 0.13
PDX1P52945 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.89■□□□□ 0.13
PDX1P52945 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PDX1P52945 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.89■□□□□ 0.13
PDX1P52945 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDX1P52945 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.89■□□□□ 0.13
PDX1P52945 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDX1P52945 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDX1P52945 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDX1P52945 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.89■□□□□ 0.13
PDX1P52945 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDX1P52945 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDX1P52945 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
PDX1P52945 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDX1P52945 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDX1P52945 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDX1P52945 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PDX1P52945 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDX1P52945 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.88■□□□□ 0.13
PDX1P52945 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.88■□□□□ 0.13
PDX1P52945 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDX1P52945 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDX1P52945 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDX1P52945 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
PDX1P52945 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.88■□□□□ 0.13
PDX1P52945 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDX1P52945 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDX1P52945 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDX1P52945 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDX1P52945 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PDX1P52945 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDX1P52945 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDX1P52945 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PDX1P52945 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDX1P52945 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
PDX1P52945 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDX1P52945 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms