Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
CDC34P49427 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.02□□□□□ -0.33
CDC34P49427 AC009533.2-201ENST00000543664 586 ntBASIC13.02□□□□□ -0.33
CDC34P49427 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CDC34P49427 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.02□□□□□ -0.33
CDC34P49427 AC011840.4-201ENST00000578471 627 ntBASIC13.02□□□□□ -0.33
CDC34P49427 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.02□□□□□ -0.33
CDC34P49427 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.02□□□□□ -0.33
CDC34P49427 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.02□□□□□ -0.33
CDC34P49427 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDC34P49427 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDC34P49427 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.02□□□□□ -0.33
CDC34P49427 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDC34P49427 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDC34P49427 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDC34P49427 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDC34P49427 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.02□□□□□ -0.33
CDC34P49427 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CDC34P49427 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDC34P49427 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDC34P49427 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CDC34P49427 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDC34P49427 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDC34P49427 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.02□□□□□ -0.33
CDC34P49427 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDC34P49427 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDC34P49427 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.01□□□□□ -0.33
CDC34P49427 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 AL009178.2-201ENST00000597278 2719 ntBASIC13.01□□□□□ -0.33
CDC34P49427 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 MIR648-201ENST00000385046 94 ntBASIC13.01□□□□□ -0.33
CDC34P49427 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 SLC25A3P1-201ENST00000443844 931 ntBASIC13.01□□□□□ -0.33
CDC34P49427 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.01□□□□□ -0.33
CDC34P49427 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.01□□□□□ -0.33
CDC34P49427 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.01□□□□□ -0.33
CDC34P49427 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.01□□□□□ -0.33
CDC34P49427 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.01□□□□□ -0.33
CDC34P49427 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
CDC34P49427 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.01□□□□□ -0.33
CDC34P49427 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.01□□□□□ -0.33
CDC34P49427 AL353801.3-201ENST00000609898 542 ntBASIC13.01□□□□□ -0.33
CDC34P49427 AL592071.1-201ENST00000611956 408 ntBASIC13.01□□□□□ -0.33
CDC34P49427 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.01□□□□□ -0.33
CDC34P49427 WDR6-223ENST00000627177 207 ntTSL 2 BASIC13.01□□□□□ -0.33
CDC34P49427 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.01□□□□□ -0.33
CDC34P49427 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CDC34P49427 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.01□□□□□ -0.33
CDC34P49427 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.01□□□□□ -0.33
CDC34P49427 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CDC34P49427 LINC01144-201ENST00000626198 1710 ntBASIC13.01□□□□□ -0.33
CDC34P49427 SNX33P1-201ENST00000592116 1762 ntBASIC13.01□□□□□ -0.33
CDC34P49427 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CDC34P49427 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.01□□□□□ -0.33
CDC34P49427 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
CDC34P49427 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.01□□□□□ -0.33
CDC34P49427 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
CDC34P49427 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC34P49427 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CDC34P49427 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13□□□□□ -0.33
CDC34P49427 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13□□□□□ -0.33
CDC34P49427 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13□□□□□ -0.33
CDC34P49427 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13□□□□□ -0.33
CDC34P49427 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13□□□□□ -0.33
CDC34P49427 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDC34P49427 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms