Protein–RNA interactions for Protein: P29508

SERPINB3, Serpin B3, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINB3P29508 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SERPINB3P29508 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SERPINB3P29508 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SERPINB3P29508 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SERPINB3P29508 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SERPINB3P29508 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SERPINB3P29508 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SERPINB3P29508 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.4■□□□□ 0.22
SERPINB3P29508 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.4■□□□□ 0.22
SERPINB3P29508 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.4■□□□□ 0.22
SERPINB3P29508 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.4■□□□□ 0.22
SERPINB3P29508 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.4■□□□□ 0.22
SERPINB3P29508 AL353135.1-201ENST00000606729 504 ntBASIC16.4■□□□□ 0.22
SERPINB3P29508 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SERPINB3P29508 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SERPINB3P29508 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SERPINB3P29508 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.4■□□□□ 0.22
SERPINB3P29508 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SERPINB3P29508 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SERPINB3P29508 AC006277.1-201ENST00000624348 1610 ntBASIC16.4■□□□□ 0.22
SERPINB3P29508 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SERPINB3P29508 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SERPINB3P29508 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.4■□□□□ 0.22
SERPINB3P29508 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.4■□□□□ 0.22
SERPINB3P29508 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.4■□□□□ 0.22
SERPINB3P29508 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SERPINB3P29508 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SERPINB3P29508 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SERPINB3P29508 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SERPINB3P29508 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
SERPINB3P29508 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SERPINB3P29508 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.39■□□□□ 0.21
SERPINB3P29508 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.39■□□□□ 0.21
SERPINB3P29508 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SERPINB3P29508 KRT8P49-201ENST00000604166 1432 ntBASIC16.39■□□□□ 0.21
SERPINB3P29508 AL671710.1-201ENST00000610245 2349 ntBASIC16.39■□□□□ 0.21
SERPINB3P29508 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SERPINB3P29508 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SERPINB3P29508 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SERPINB3P29508 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SERPINB3P29508 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.39■□□□□ 0.21
SERPINB3P29508 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.39■□□□□ 0.21
SERPINB3P29508 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SERPINB3P29508 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.39■□□□□ 0.21
SERPINB3P29508 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SERPINB3P29508 TERC-201ENST00000602385 541 ntBASIC16.39■□□□□ 0.21
SERPINB3P29508 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SERPINB3P29508 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.39■□□□□ 0.21
SERPINB3P29508 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.39■□□□□ 0.21
SERPINB3P29508 PPT1-215ENST00000641471 2368 ntBASIC16.39■□□□□ 0.21
SERPINB3P29508 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SERPINB3P29508 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SERPINB3P29508 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SERPINB3P29508 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.39■□□□□ 0.21
SERPINB3P29508 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SERPINB3P29508 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SERPINB3P29508 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SERPINB3P29508 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SERPINB3P29508 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SERPINB3P29508 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SERPINB3P29508 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.39■□□□□ 0.21
SERPINB3P29508 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.39■□□□□ 0.21
SERPINB3P29508 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SERPINB3P29508 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SERPINB3P29508 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SERPINB3P29508 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SERPINB3P29508 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SERPINB3P29508 NORAD-201ENST00000565493 5339 ntBASIC16.38■□□□□ 0.21
SERPINB3P29508 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SERPINB3P29508 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SERPINB3P29508 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SERPINB3P29508 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SERPINB3P29508 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.38■□□□□ 0.21
SERPINB3P29508 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.38■□□□□ 0.21
SERPINB3P29508 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SERPINB3P29508 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SERPINB3P29508 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SERPINB3P29508 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SERPINB3P29508 AC006058.4-201ENST00000624016 1670 ntBASIC16.38■□□□□ 0.21
SERPINB3P29508 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
SERPINB3P29508 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SERPINB3P29508 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SERPINB3P29508 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.38■□□□□ 0.21
SERPINB3P29508 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.38■□□□□ 0.21
SERPINB3P29508 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.38■□□□□ 0.21
SERPINB3P29508 AC013467.2-201ENST00000605472 835 ntBASIC16.38■□□□□ 0.21
SERPINB3P29508 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.38■□□□□ 0.21
SERPINB3P29508 TCAF2P1-201ENST00000291129 2421 ntBASIC16.38■□□□□ 0.21
SERPINB3P29508 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SERPINB3P29508 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SERPINB3P29508 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SERPINB3P29508 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SERPINB3P29508 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SERPINB3P29508 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
SERPINB3P29508 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SERPINB3P29508 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SERPINB3P29508 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SERPINB3P29508 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
SERPINB3P29508 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SERPINB3P29508 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms