Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL8A2P25067 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.86□□□□□ -0.19
COL8A2P25067 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.86□□□□□ -0.19
COL8A2P25067 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
COL8A2P25067 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
COL8A2P25067 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL8A2P25067 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL8A2P25067 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.86□□□□□ -0.19
COL8A2P25067 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL8A2P25067 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
COL8A2P25067 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
COL8A2P25067 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
COL8A2P25067 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.85□□□□□ -0.19
COL8A2P25067 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
COL8A2P25067 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.85□□□□□ -0.19
COL8A2P25067 AC098859.1-201ENST00000502915 1238 ntBASIC13.85□□□□□ -0.19
COL8A2P25067 AC097493.3-201ENST00000509725 367 ntBASIC13.85□□□□□ -0.19
COL8A2P25067 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.85□□□□□ -0.19
COL8A2P25067 IGHV3-42-201ENST00000520410 361 ntBASIC13.85□□□□□ -0.19
COL8A2P25067 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.85□□□□□ -0.19
COL8A2P25067 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.85□□□□□ -0.19
COL8A2P25067 AC020765.3-201ENST00000613051 740 ntBASIC13.85□□□□□ -0.19
COL8A2P25067 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 GPAA1P2-202ENST00000606848 1787 ntBASIC13.85□□□□□ -0.19
COL8A2P25067 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.85□□□□□ -0.19
COL8A2P25067 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
COL8A2P25067 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.85□□□□□ -0.19
COL8A2P25067 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.85□□□□□ -0.19
COL8A2P25067 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.85□□□□□ -0.19
COL8A2P25067 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL8A2P25067 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL8A2P25067 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL8A2P25067 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL8A2P25067 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL8A2P25067 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.84□□□□□ -0.19
COL8A2P25067 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.84□□□□□ -0.19
COL8A2P25067 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL8A2P25067 AL662844.4-201ENST00000606367 2838 ntBASIC13.84□□□□□ -0.19
COL8A2P25067 LINC00554-201ENST00000564841 3011 ntBASIC13.84□□□□□ -0.19
COL8A2P25067 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.84□□□□□ -0.19
COL8A2P25067 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL8A2P25067 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
COL8A2P25067 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
COL8A2P25067 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COL8A2P25067 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
COL8A2P25067 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL8A2P25067 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
COL8A2P25067 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.84□□□□□ -0.19
COL8A2P25067 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.84□□□□□ -0.19
COL8A2P25067 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL8A2P25067 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.84□□□□□ -0.19
COL8A2P25067 RNA5SP421-201ENST00000516864 134 ntBASIC13.84□□□□□ -0.19
COL8A2P25067 AC069120.2-201ENST00000524091 540 ntBASIC13.84□□□□□ -0.19
COL8A2P25067 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.84□□□□□ -0.19
COL8A2P25067 MIR3197-201ENST00000582241 73 ntBASIC13.84□□□□□ -0.19
COL8A2P25067 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.84□□□□□ -0.19
COL8A2P25067 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.84□□□□□ -0.19
COL8A2P25067 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL8A2P25067 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.84□□□□□ -0.19
COL8A2P25067 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL8A2P25067 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL8A2P25067 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL8A2P25067 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
COL8A2P25067 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
COL8A2P25067 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.84□□□□□ -0.19
COL8A2P25067 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
COL8A2P25067 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL8A2P25067 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL8A2P25067 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL8A2P25067 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL8A2P25067 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
COL8A2P25067 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.83□□□□□ -0.19
COL8A2P25067 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
COL8A2P25067 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
COL8A2P25067 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms