Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKCAP17252 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKCAP17252 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.26■□□□□ 0.03
PRKCAP17252 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.25■□□□□ 0.03
PRKCAP17252 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.25■□□□□ 0.03
PRKCAP17252 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.25■□□□□ 0.03
PRKCAP17252 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PRKCAP17252 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.25■□□□□ 0.03
PRKCAP17252 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.25■□□□□ 0.03
PRKCAP17252 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.25■□□□□ 0.03
PRKCAP17252 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.25■□□□□ 0.03
PRKCAP17252 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.25■□□□□ 0.03
PRKCAP17252 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PRKCAP17252 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.25■□□□□ 0.03
PRKCAP17252 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
PRKCAP17252 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PRKCAP17252 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PRKCAP17252 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.25■□□□□ 0.03
PRKCAP17252 RHOQP3-201ENST00000437982 621 ntBASIC15.25■□□□□ 0.03
PRKCAP17252 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.25■□□□□ 0.03
PRKCAP17252 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.25■□□□□ 0.03
PRKCAP17252 CYP2A7P1-201ENST00000595391 815 ntBASIC15.25■□□□□ 0.03
PRKCAP17252 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 AP001350.2-201ENST00000625104 1094 ntBASIC15.25■□□□□ 0.03
PRKCAP17252 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.25■□□□□ 0.03
PRKCAP17252 AL139011.1-202ENST00000642063 584 ntBASIC15.25■□□□□ 0.03
PRKCAP17252 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.25■□□□□ 0.03
PRKCAP17252 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PRKCAP17252 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.25■□□□□ 0.03
PRKCAP17252 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.25■□□□□ 0.03
PRKCAP17252 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.25■□□□□ 0.03
PRKCAP17252 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRKCAP17252 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.25■□□□□ 0.03
PRKCAP17252 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.24■□□□□ 0.03
PRKCAP17252 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
PRKCAP17252 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.24■□□□□ 0.03
PRKCAP17252 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PRKCAP17252 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PRKCAP17252 AC092384.3-202ENST00000564646 2873 ntBASIC15.24■□□□□ 0.03
PRKCAP17252 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.24■□□□□ 0.03
PRKCAP17252 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 CICP4-201ENST00000447359 2812 ntBASIC15.24■□□□□ 0.03
PRKCAP17252 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 CICP13-201ENST00000422015 2789 ntBASIC15.24■□□□□ 0.03
PRKCAP17252 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.24■□□□□ 0.03
PRKCAP17252 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.24■□□□□ 0.03
PRKCAP17252 AL022342.1-201ENST00000400363 863 ntBASIC15.24■□□□□ 0.03
PRKCAP17252 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
PRKCAP17252 AL591424.1-201ENST00000442569 1213 ntBASIC15.24■□□□□ 0.03
PRKCAP17252 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 AL513480.1-201ENST00000451731 511 ntBASIC15.24■□□□□ 0.03
PRKCAP17252 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.24■□□□□ 0.03
PRKCAP17252 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.24■□□□□ 0.03
PRKCAP17252 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.24■□□□□ 0.03
PRKCAP17252 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.24■□□□□ 0.03
PRKCAP17252 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 MIR4515-201ENST00000584082 81 ntBASIC15.24■□□□□ 0.03
PRKCAP17252 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.24■□□□□ 0.03
PRKCAP17252 AC140113.2-201ENST00000604370 208 ntBASIC15.24■□□□□ 0.03
PRKCAP17252 AC027601.4-201ENST00000611259 610 ntBASIC15.24■□□□□ 0.03
PRKCAP17252 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.24■□□□□ 0.03
PRKCAP17252 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms