Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC106028.4-201ENST00000614509 607 ntBASIC19.26■□□□□ 0.67
TOP1P11387 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.26■□□□□ 0.67
TOP1P11387 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.26■□□□□ 0.67
TOP1P11387 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOP1P11387 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOP1P11387 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOP1P11387 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TOP1P11387 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOP1P11387 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.26■□□□□ 0.67
TOP1P11387 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TOP1P11387 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TOP1P11387 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOP1P11387 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOP1P11387 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOP1P11387 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.25■□□□□ 0.67
TOP1P11387 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.25■□□□□ 0.67
TOP1P11387 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.25■□□□□ 0.67
TOP1P11387 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.25■□□□□ 0.67
TOP1P11387 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.25■□□□□ 0.67
TOP1P11387 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.25■□□□□ 0.67
TOP1P11387 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.25■□□□□ 0.67
TOP1P11387 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TOP1P11387 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.25■□□□□ 0.67
TOP1P11387 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TOP1P11387 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TOP1P11387 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.25■□□□□ 0.67
TOP1P11387 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TOP1P11387 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TOP1P11387 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TOP1P11387 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TOP1P11387 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TOP1P11387 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.25■□□□□ 0.67
TOP1P11387 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.25■□□□□ 0.67
TOP1P11387 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.25■□□□□ 0.67
TOP1P11387 AC093724.1-201ENST00000448659 1027 ntBASIC19.25■□□□□ 0.67
TOP1P11387 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TOP1P11387 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.25■□□□□ 0.67
TOP1P11387 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.25■□□□□ 0.67
TOP1P11387 SPTSSB-204ENST00000617024 1292 ntBASIC19.25■□□□□ 0.67
TOP1P11387 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
TOP1P11387 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.25■□□□□ 0.67
TOP1P11387 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.25■□□□□ 0.67
TOP1P11387 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TOP1P11387 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TOP1P11387 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TOP1P11387 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
TOP1P11387 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
TOP1P11387 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TOP1P11387 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TOP1P11387 FER1L4-210ENST00000615531 5998 ntBASIC19.25■□□□□ 0.67
TOP1P11387 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TOP1P11387 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TOP1P11387 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TOP1P11387 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.24■□□□□ 0.67
TOP1P11387 AP3S2-216ENST00000617003 1561 ntBASIC19.24■□□□□ 0.67
TOP1P11387 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TOP1P11387 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.24■□□□□ 0.67
TOP1P11387 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TOP1P11387 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TOP1P11387 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.24■□□□□ 0.67
TOP1P11387 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TOP1P11387 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.24■□□□□ 0.67
TOP1P11387 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TOP1P11387 CNN2P2-201ENST00000443536 909 ntBASIC19.24■□□□□ 0.67
TOP1P11387 CNN2P3-201ENST00000450201 906 ntBASIC19.24■□□□□ 0.67
TOP1P11387 AC098859.1-201ENST00000502915 1238 ntBASIC19.24■□□□□ 0.67
TOP1P11387 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.24■□□□□ 0.67
TOP1P11387 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.24■□□□□ 0.67
TOP1P11387 AL136317.3-201ENST00000618497 906 ntBASIC19.24■□□□□ 0.67
TOP1P11387 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.24■□□□□ 0.67
TOP1P11387 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TOP1P11387 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TOP1P11387 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TOP1P11387 PCGF3-213ENST00000620529 1899 ntBASIC19.24■□□□□ 0.67
TOP1P11387 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.24■□□□□ 0.67
TOP1P11387 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TOP1P11387 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TOP1P11387 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TOP1P11387 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.23■□□□□ 0.67
TOP1P11387 AC008894.3-201ENST00000624324 3103 ntBASIC19.23■□□□□ 0.67
TOP1P11387 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.23■□□□□ 0.67
TOP1P11387 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TOP1P11387 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TOP1P11387 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TOP1P11387 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TOP1P11387 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TOP1P11387 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
TOP1P11387 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TOP1P11387 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.23■□□□□ 0.67
TOP1P11387 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TOP1P11387 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TOP1P11387 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TOP1P11387 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TOP1P11387 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TOP1P11387 SPDYE7P-202ENST00000420373 878 ntBASIC19.23■□□□□ 0.67
TOP1P11387 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.23■□□□□ 0.67
TOP1P11387 FAM86GP-201ENST00000448322 971 ntBASIC19.23■□□□□ 0.67
TOP1P11387 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.23■□□□□ 0.67
TOP1P11387 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.23■□□□□ 0.67
TOP1P11387 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms