Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRAP04437 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
TCRAP04437 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TCRAP04437 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC12.53□□□□□ -0.4
TCRAP04437 IGHV3-47-201ENST00000425060 335 ntBASIC12.53□□□□□ -0.4
TCRAP04437 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.53□□□□□ -0.4
TCRAP04437 PAWRP1-201ENST00000451083 565 ntBASIC12.53□□□□□ -0.4
TCRAP04437 PRYP5-201ENST00000451909 266 ntBASIC12.53□□□□□ -0.4
TCRAP04437 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC12.53□□□□□ -0.4
TCRAP04437 TOB2P1-201ENST00000469761 992 ntBASIC12.53□□□□□ -0.4
TCRAP04437 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TCRAP04437 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.53□□□□□ -0.4
TCRAP04437 LTBR-211ENST00000543190 785 ntTSL 3 BASIC12.53□□□□□ -0.4
TCRAP04437 CIB2-208ENST00000560618 804 ntTSL 2 BASIC12.53□□□□□ -0.4
TCRAP04437 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC12.53□□□□□ -0.4
TCRAP04437 CYP2A7P1-201ENST00000595391 815 ntBASIC12.53□□□□□ -0.4
TCRAP04437 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC12.53□□□□□ -0.4
TCRAP04437 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
TCRAP04437 AC020765.3-201ENST00000613051 740 ntBASIC12.53□□□□□ -0.4
TCRAP04437 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.53□□□□□ -0.4
TCRAP04437 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRAP04437 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.53□□□□□ -0.4
TCRAP04437 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TCRAP04437 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.53□□□□□ -0.4
TCRAP04437 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TCRAP04437 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.53□□□□□ -0.4
TCRAP04437 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TCRAP04437 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRAP04437 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.53□□□□□ -0.4
TCRAP04437 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRAP04437 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
TCRAP04437 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TCRAP04437 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRAP04437 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TCRAP04437 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRAP04437 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRAP04437 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.53□□□□□ -0.4
TCRAP04437 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.53□□□□□ -0.4
TCRAP04437 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRAP04437 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TCRAP04437 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.4
TCRAP04437 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TCRAP04437 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.52□□□□□ -0.4
TCRAP04437 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TCRAP04437 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TCRAP04437 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TCRAP04437 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
TCRAP04437 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.52□□□□□ -0.4
TCRAP04437 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
TCRAP04437 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TCRAP04437 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TCRAP04437 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.52□□□□□ -0.4
TCRAP04437 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
TCRAP04437 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
TCRAP04437 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.52□□□□□ -0.41
TCRAP04437 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.52□□□□□ -0.41
TCRAP04437 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TCRAP04437 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TCRAP04437 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
TCRAP04437 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
TCRAP04437 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC12.52□□□□□ -0.41
TCRAP04437 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 TPSP2-201ENST00000561760 610 ntBASIC12.52□□□□□ -0.41
TCRAP04437 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
TCRAP04437 REXO1L3P-201ENST00000622202 1288 ntBASIC12.52□□□□□ -0.41
TCRAP04437 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.52□□□□□ -0.41
TCRAP04437 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TCRAP04437 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.52□□□□□ -0.41
TCRAP04437 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TCRAP04437 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms