Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.78□□□□□ -0.2
SIX6O95475 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.78□□□□□ -0.2
SIX6O95475 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.78□□□□□ -0.2
SIX6O95475 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
SIX6O95475 AC092666.2-201ENST00000613287 246 ntBASIC13.78□□□□□ -0.2
SIX6O95475 AC026471.5-201ENST00000615068 467 ntBASIC13.78□□□□□ -0.2
SIX6O95475 AL359736.2-201ENST00000621992 437 ntBASIC13.78□□□□□ -0.2
SIX6O95475 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.78□□□□□ -0.2
SIX6O95475 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SIX6O95475 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
SIX6O95475 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SIX6O95475 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SIX6O95475 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SIX6O95475 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIX6O95475 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIX6O95475 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.78□□□□□ -0.2
SIX6O95475 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIX6O95475 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.78□□□□□ -0.2
SIX6O95475 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.78□□□□□ -0.2
SIX6O95475 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIX6O95475 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SIX6O95475 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIX6O95475 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIX6O95475 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.78□□□□□ -0.2
SIX6O95475 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.78□□□□□ -0.2
SIX6O95475 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SIX6O95475 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIX6O95475 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIX6O95475 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
SIX6O95475 OR2I1P-209ENST00000641730 5365 ntBASIC13.77□□□□□ -0.2
SIX6O95475 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.77□□□□□ -0.2
SIX6O95475 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SIX6O95475 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SIX6O95475 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
SIX6O95475 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.77□□□□□ -0.2
SIX6O95475 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
SIX6O95475 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 UNC93B2-201ENST00000285383 730 ntBASIC13.77□□□□□ -0.21
SIX6O95475 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.77□□□□□ -0.21
SIX6O95475 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SIX6O95475 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.77□□□□□ -0.21
SIX6O95475 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.77□□□□□ -0.21
SIX6O95475 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SIX6O95475 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
SIX6O95475 AC103564.2-201ENST00000432853 1299 ntBASIC13.77□□□□□ -0.21
SIX6O95475 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.77□□□□□ -0.21
SIX6O95475 RBM17P1-201ENST00000453646 1190 ntBASIC13.77□□□□□ -0.21
SIX6O95475 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SIX6O95475 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.77□□□□□ -0.21
SIX6O95475 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.77□□□□□ -0.21
SIX6O95475 AC122714.2-201ENST00000502787 707 ntBASIC13.77□□□□□ -0.21
SIX6O95475 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.77□□□□□ -0.21
SIX6O95475 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.77□□□□□ -0.21
SIX6O95475 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 C2orf69P3-201ENST00000565542 1120 ntBASIC13.77□□□□□ -0.21
SIX6O95475 SNX33P1-201ENST00000592116 1762 ntBASIC13.77□□□□□ -0.21
SIX6O95475 KRT8P49-201ENST00000604166 1432 ntBASIC13.77□□□□□ -0.21
SIX6O95475 AP000525.1-201ENST00000608286 694 ntBASIC13.77□□□□□ -0.21
SIX6O95475 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.77□□□□□ -0.21
SIX6O95475 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SIX6O95475 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.77□□□□□ -0.21
SIX6O95475 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.77□□□□□ -0.21
SIX6O95475 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SIX6O95475 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.77□□□□□ -0.21
SIX6O95475 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.77□□□□□ -0.21
SIX6O95475 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIX6O95475 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.77□□□□□ -0.21
SIX6O95475 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.77□□□□□ -0.21
SIX6O95475 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms