Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 SNX29-205ENST00000566228 8171 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 SNIP1-201ENST00000296215 4605 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 DNM1P41-201ENST00000623634 3350 ntBASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 RHBDF1P1-201ENST00000427504 1941 ntBASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 KCNB1-201ENST00000371741 11879 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 UNC93B3-201ENST00000308076 687 ntBASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 RER1-204ENST00000378518 522 ntTSL 3 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 STOX2-205ENST00000513034 807 ntTSL 3 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 MAX-217ENST00000557277 728 ntTSL 3 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 SEC16A-206ENST00000431893 6465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 GNB5-201ENST00000261837 8906 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 AC009102.3-201ENST00000623118 1491 ntBASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 ATP8A1-201ENST00000264449 8209 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 AC006538.1-201ENST00000567905 1585 ntBASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 AC116353.5-201ENST00000638148 1699 ntBASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC9.07□□□□□ -0.96
CHKB-CPT1BH3BT56 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 RNF216P1-203ENST00000404404 2427 ntBASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms