Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 AL355334.1-201ENST00000417713 215 ntBASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 AC068880.1-201ENST00000507289 2297 ntBASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C1QTNF9BB2RNN3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 AC007969.1-201ENST00000433675 447 ntBASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 CHMP4BP1-201ENST00000556017 588 ntBASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 AC036164.1-201ENST00000570544 333 ntBASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 AC005702.4-201ENST00000618393 416 ntBASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 LINC01451-201ENST00000623792 534 ntBASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 AC008687.7-202ENST00000637404 953 ntBASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.27■□□□□ 0.04
C1QTNF9BB2RNN3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C1QTNF9BB2RNN3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C1QTNF9BB2RNN3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.27■□□□□ 0.03
C1QTNF9BB2RNN3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C1QTNF9BB2RNN3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
C1QTNF9BB2RNN3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.27■□□□□ 0.03
C1QTNF9BB2RNN3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
C1QTNF9BB2RNN3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
C1QTNF9BB2RNN3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
C1QTNF9BB2RNN3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
C1QTNF9BB2RNN3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C1QTNF9BB2RNN3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.27■□□□□ 0.03
C1QTNF9BB2RNN3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C1QTNF9BB2RNN3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.27■□□□□ 0.03
C1QTNF9BB2RNN3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
C1QTNF9BB2RNN3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1QTNF9BB2RNN3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1QTNF9BB2RNN3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1QTNF9BB2RNN3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
C1QTNF9BB2RNN3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.26■□□□□ 0.03
C1QTNF9BB2RNN3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C1QTNF9BB2RNN3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1QTNF9BB2RNN3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1QTNF9BB2RNN3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1QTNF9BB2RNN3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C1QTNF9BB2RNN3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
C1QTNF9BB2RNN3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1QTNF9BB2RNN3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1QTNF9BB2RNN3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.26■□□□□ 0.03
C1QTNF9BB2RNN3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
C1QTNF9BB2RNN3 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1QTNF9BB2RNN3 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1QTNF9BB2RNN3 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C1QTNF9BB2RNN3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
C1QTNF9BB2RNN3 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1QTNF9BB2RNN3 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.26■□□□□ 0.03
C1QTNF9BB2RNN3 IMP3P2-201ENST00000489760 475 ntBASIC15.26■□□□□ 0.03
C1QTNF9BB2RNN3 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms