Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TVP23AA6NH52 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TVP23AA6NH52 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
TVP23AA6NH52 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TVP23AA6NH52 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TVP23AA6NH52 LINC01144-201ENST00000626198 1710 ntBASIC14.72□□□□□ -0.05
TVP23AA6NH52 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.72□□□□□ -0.05
TVP23AA6NH52 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TVP23AA6NH52 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TVP23AA6NH52 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.71□□□□□ -0.05
TVP23AA6NH52 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TVP23AA6NH52 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TVP23AA6NH52 AC105917.1-201ENST00000506637 2539 ntBASIC14.71□□□□□ -0.05
TVP23AA6NH52 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
TVP23AA6NH52 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.71□□□□□ -0.05
TVP23AA6NH52 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TVP23AA6NH52 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.71□□□□□ -0.05
TVP23AA6NH52 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TVP23AA6NH52 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.71□□□□□ -0.05
TVP23AA6NH52 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TVP23AA6NH52 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TVP23AA6NH52 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.71□□□□□ -0.05
TVP23AA6NH52 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TVP23AA6NH52 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TVP23AA6NH52 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TVP23AA6NH52 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TVP23AA6NH52 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TVP23AA6NH52 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TVP23AA6NH52 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TVP23AA6NH52 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TVP23AA6NH52 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TVP23AA6NH52 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TVP23AA6NH52 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.71□□□□□ -0.05
TVP23AA6NH52 HCG4-201ENST00000418983 998 ntBASIC14.71□□□□□ -0.05
TVP23AA6NH52 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.71□□□□□ -0.05
TVP23AA6NH52 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.71□□□□□ -0.05
TVP23AA6NH52 IGHV3-65-201ENST00000523210 341 ntBASIC14.71□□□□□ -0.05
TVP23AA6NH52 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.71□□□□□ -0.05
TVP23AA6NH52 AC105339.3-201ENST00000560043 636 ntBASIC14.71□□□□□ -0.05
TVP23AA6NH52 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TVP23AA6NH52 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TVP23AA6NH52 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.71□□□□□ -0.05
TVP23AA6NH52 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TVP23AA6NH52 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TVP23AA6NH52 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.71□□□□□ -0.05
TVP23AA6NH52 AC068418.2-201ENST00000577309 3703 ntBASIC14.71□□□□□ -0.05
TVP23AA6NH52 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TVP23AA6NH52 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TVP23AA6NH52 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
TVP23AA6NH52 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TVP23AA6NH52 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.71□□□□□ -0.06
TVP23AA6NH52 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.71□□□□□ -0.06
TVP23AA6NH52 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TVP23AA6NH52 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.71□□□□□ -0.06
TVP23AA6NH52 LINC00554-201ENST00000564841 3011 ntBASIC14.71□□□□□ -0.06
TVP23AA6NH52 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
TVP23AA6NH52 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TVP23AA6NH52 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
TVP23AA6NH52 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
TVP23AA6NH52 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TVP23AA6NH52 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TVP23AA6NH52 AC103702.1-201ENST00000548801 2630 ntBASIC14.7□□□□□ -0.06
TVP23AA6NH52 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.7□□□□□ -0.06
TVP23AA6NH52 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.7□□□□□ -0.06
TVP23AA6NH52 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TVP23AA6NH52 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TVP23AA6NH52 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TVP23AA6NH52 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TVP23AA6NH52 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.7□□□□□ -0.06
TVP23AA6NH52 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TVP23AA6NH52 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TVP23AA6NH52 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.7□□□□□ -0.06
TVP23AA6NH52 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.7□□□□□ -0.06
TVP23AA6NH52 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.7□□□□□ -0.06
TVP23AA6NH52 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.7□□□□□ -0.06
TVP23AA6NH52 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.7□□□□□ -0.06
TVP23AA6NH52 POU5F1P6-201ENST00000466990 990 ntBASIC14.7□□□□□ -0.06
TVP23AA6NH52 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.7□□□□□ -0.06
TVP23AA6NH52 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.7□□□□□ -0.06
TVP23AA6NH52 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.7□□□□□ -0.06
TVP23AA6NH52 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.7□□□□□ -0.06
TVP23AA6NH52 AC004790.2-201ENST00000623588 572 ntBASIC14.7□□□□□ -0.06
TVP23AA6NH52 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TVP23AA6NH52 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TVP23AA6NH52 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TVP23AA6NH52 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TVP23AA6NH52 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.7□□□□□ -0.06
TVP23AA6NH52 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.7□□□□□ -0.06
TVP23AA6NH52 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.7□□□□□ -0.06
TVP23AA6NH52 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TVP23AA6NH52 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TVP23AA6NH52 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms