Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 LITAF-210ENST00000571976 548 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 LITAF-214ENST00000574703 486 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 MIR4745-201ENST00000577608 62 ntBASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 AC022211.2-201ENST00000585075 2527 ntBASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 SPDYE12P-201ENST00000618416 771 ntBASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 AC106886.4-201ENST00000623557 2502 ntBASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 AC005622.1-201ENST00000636801 1703 ntBASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00588Q9Y4M8 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 GREM1-201ENST00000560677 623 ntTSL 4 BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 RN7SL828P-201ENST00000607615 303 ntBASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 AL138828.2-201ENST00000615812 383 ntBASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 GPER1-207ENST00000619052 571 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
LINC00588Q9Y4M8 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00588Q9Y4M8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00588Q9Y4M8 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
LINC00588Q9Y4M8 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00588Q9Y4M8 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00588Q9Y4M8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.62
LINC00588Q9Y4M8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00588Q9Y4M8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00588Q9Y4M8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00588Q9Y4M8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC11.21□□□□□ -0.62
LINC00588Q9Y4M8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00588Q9Y4M8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC11.21□□□□□ -0.62
LINC00588Q9Y4M8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.62
LINC00588Q9Y4M8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00588Q9Y4M8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00588Q9Y4M8 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
LINC00588Q9Y4M8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.62
LINC00588Q9Y4M8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00588Q9Y4M8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC11.21□□□□□ -0.62
LINC00588Q9Y4M8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00588Q9Y4M8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00588Q9Y4M8 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms