Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.32■□□□□ 0.04
TM9SF2Q99805 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
TM9SF2Q99805 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
TM9SF2Q99805 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TM9SF2Q99805 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TM9SF2Q99805 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 MCCD1P2-201ENST00000423228 335 ntBASIC15.31■□□□□ 0.04
TM9SF2Q99805 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.31■□□□□ 0.04
TM9SF2Q99805 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.31■□□□□ 0.04
TM9SF2Q99805 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.31■□□□□ 0.04
TM9SF2Q99805 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.31■□□□□ 0.04
TM9SF2Q99805 AC096734.2-201ENST00000562054 433 ntBASIC15.31■□□□□ 0.04
TM9SF2Q99805 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.31■□□□□ 0.04
TM9SF2Q99805 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.31■□□□□ 0.04
TM9SF2Q99805 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.31■□□□□ 0.04
TM9SF2Q99805 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.31■□□□□ 0.04
TM9SF2Q99805 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TM9SF2Q99805 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.31■□□□□ 0.04
TM9SF2Q99805 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.31■□□□□ 0.04
TM9SF2Q99805 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.31■□□□□ 0.04
TM9SF2Q99805 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TM9SF2Q99805 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.31■□□□□ 0.04
TM9SF2Q99805 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.31■□□□□ 0.04
TM9SF2Q99805 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.31■□□□□ 0.04
TM9SF2Q99805 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.31■□□□□ 0.04
TM9SF2Q99805 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.31■□□□□ 0.04
TM9SF2Q99805 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TM9SF2Q99805 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.3■□□□□ 0.04
TM9SF2Q99805 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.3■□□□□ 0.04
TM9SF2Q99805 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF2Q99805 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF2Q99805 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF2Q99805 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TM9SF2Q99805 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF2Q99805 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF2Q99805 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.3■□□□□ 0.04
TM9SF2Q99805 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF2Q99805 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF2Q99805 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.3■□□□□ 0.04
TM9SF2Q99805 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF2Q99805 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF2Q99805 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.3■□□□□ 0.04
TM9SF2Q99805 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF2Q99805 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.3■□□□□ 0.04
TM9SF2Q99805 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.3■□□□□ 0.04
TM9SF2Q99805 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
TM9SF2Q99805 AC007064.4-201ENST00000637740 555 ntBASIC15.3■□□□□ 0.04
TM9SF2Q99805 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF2Q99805 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
TM9SF2Q99805 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF2Q99805 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF2Q99805 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF2Q99805 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF2Q99805 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TM9SF2Q99805 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF2Q99805 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF2Q99805 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
TM9SF2Q99805 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TM9SF2Q99805 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TM9SF2Q99805 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF2Q99805 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF2Q99805 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TM9SF2Q99805 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF2Q99805 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
TM9SF2Q99805 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF2Q99805 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF2Q99805 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TM9SF2Q99805 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF2Q99805 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.29■□□□□ 0.04
TM9SF2Q99805 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
TM9SF2Q99805 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF2Q99805 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF2Q99805 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.29■□□□□ 0.04
TM9SF2Q99805 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF2Q99805 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms