Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CCL13Q99616 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCL13Q99616 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL13Q99616 ME2P1-201ENST00000426028 1970 ntBASIC13.76□□□□□ -0.21
CCL13Q99616 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL13Q99616 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL13Q99616 AC005622.1-201ENST00000636801 1703 ntBASIC13.76□□□□□ -0.21
CCL13Q99616 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL13Q99616 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.76□□□□□ -0.21
CCL13Q99616 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCL13Q99616 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL13Q99616 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.76□□□□□ -0.21
CCL13Q99616 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL13Q99616 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CCL13Q99616 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL13Q99616 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.76□□□□□ -0.21
CCL13Q99616 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL13Q99616 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CCL13Q99616 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL13Q99616 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CCL13Q99616 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL13Q99616 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCL13Q99616 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
CCL13Q99616 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL13Q99616 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL13Q99616 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
CCL13Q99616 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.76□□□□□ -0.21
CCL13Q99616 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.76□□□□□ -0.21
CCL13Q99616 IGHV3-62-201ENST00000520057 340 ntBASIC13.76□□□□□ -0.21
CCL13Q99616 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.76□□□□□ -0.21
CCL13Q99616 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.76□□□□□ -0.21
CCL13Q99616 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL13Q99616 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.76□□□□□ -0.21
CCL13Q99616 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL13Q99616 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.76□□□□□ -0.21
CCL13Q99616 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.76□□□□□ -0.21
CCL13Q99616 AL691403.2-201ENST00000618460 490 ntBASIC13.76□□□□□ -0.21
CCL13Q99616 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.76□□□□□ -0.21
CCL13Q99616 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL13Q99616 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL13Q99616 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCL13Q99616 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CCL13Q99616 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.76□□□□□ -0.21
CCL13Q99616 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCL13Q99616 AL118508.1-201ENST00000613502 2345 ntBASIC13.76□□□□□ -0.21
CCL13Q99616 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL13Q99616 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCL13Q99616 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL13Q99616 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL13Q99616 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL13Q99616 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL13Q99616 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL13Q99616 PCDH8P1-201ENST00000428983 2773 ntBASIC13.76□□□□□ -0.21
CCL13Q99616 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL13Q99616 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.76□□□□□ -0.21
CCL13Q99616 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL13Q99616 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCL13Q99616 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL13Q99616 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCL13Q99616 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
CCL13Q99616 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.75□□□□□ -0.21
CCL13Q99616 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CCL13Q99616 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL13Q99616 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL13Q99616 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CCL13Q99616 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.75□□□□□ -0.21
CCL13Q99616 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCL13Q99616 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL13Q99616 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.75□□□□□ -0.21
CCL13Q99616 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL13Q99616 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCL13Q99616 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.75□□□□□ -0.21
CCL13Q99616 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CCL13Q99616 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCL13Q99616 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CCL13Q99616 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL13Q99616 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.75□□□□□ -0.21
CCL13Q99616 AL592309.1-201ENST00000443127 649 ntBASIC13.75□□□□□ -0.21
CCL13Q99616 AC004967.1-201ENST00000453589 447 ntBASIC13.75□□□□□ -0.21
CCL13Q99616 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.75□□□□□ -0.21
CCL13Q99616 PRYP6-201ENST00000514804 343 ntBASIC13.75□□□□□ -0.21
CCL13Q99616 AC027307.2-201ENST00000591252 911 ntBASIC13.75□□□□□ -0.21
CCL13Q99616 AL596442.2-201ENST00000610240 980 ntBASIC13.75□□□□□ -0.21
CCL13Q99616 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CCL13Q99616 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.75□□□□□ -0.21
CCL13Q99616 AC105339.1-204ENST00000636249 355 ntBASIC13.75□□□□□ -0.21
CCL13Q99616 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCL13Q99616 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL13Q99616 AC073439.1-201ENST00000624121 1774 ntBASIC13.75□□□□□ -0.21
CCL13Q99616 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL13Q99616 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CCL13Q99616 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.75□□□□□ -0.21
CCL13Q99616 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL13Q99616 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.75□□□□□ -0.21
CCL13Q99616 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CCL13Q99616 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CCL13Q99616 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL13Q99616 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL13Q99616 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.74□□□□□ -0.21
CCL13Q99616 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms