Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 PAWRP1-201ENST00000451083 565 ntBASIC14.16□□□□□ -0.14
CMTM3Q96MX0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 AC010203.1-204ENST00000548782 407 ntBASIC14.16□□□□□ -0.14
CMTM3Q96MX0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 CYP2A7P1-201ENST00000595391 815 ntBASIC14.16□□□□□ -0.14
CMTM3Q96MX0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 AC010331.1-201ENST00000611423 582 ntBASIC14.16□□□□□ -0.14
CMTM3Q96MX0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMTM3Q96MX0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 U82695.1-201ENST00000635752 1889 ntBASIC14.15□□□□□ -0.14
CMTM3Q96MX0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 TSPY5P-201ENST00000426936 936 ntBASIC14.15□□□□□ -0.14
CMTM3Q96MX0 SPDYE13P-201ENST00000445314 798 ntBASIC14.15□□□□□ -0.14
CMTM3Q96MX0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 REXO1L3P-201ENST00000622202 1288 ntBASIC14.15□□□□□ -0.14
CMTM3Q96MX0 AP001350.2-201ENST00000625104 1094 ntBASIC14.15□□□□□ -0.14
CMTM3Q96MX0 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.15□□□□□ -0.14
CMTM3Q96MX0 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CMTM3Q96MX0 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.15
CMTM3Q96MX0 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CMTM3Q96MX0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms