Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.04■□□□□ 0.16
HIPK4Q8NE63 BX276092.5-203ENST00000456199 560 ntBASIC16.04■□□□□ 0.16
HIPK4Q8NE63 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.04■□□□□ 0.16
HIPK4Q8NE63 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.04■□□□□ 0.16
HIPK4Q8NE63 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.04■□□□□ 0.16
HIPK4Q8NE63 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.04■□□□□ 0.16
HIPK4Q8NE63 AL121672.3-201ENST00000608644 468 ntBASIC16.04■□□□□ 0.16
HIPK4Q8NE63 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.04■□□□□ 0.16
HIPK4Q8NE63 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.04■□□□□ 0.16
HIPK4Q8NE63 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.04■□□□□ 0.16
HIPK4Q8NE63 AL009178.2-201ENST00000597278 2719 ntBASIC16.04■□□□□ 0.16
HIPK4Q8NE63 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIPK4Q8NE63 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HIPK4Q8NE63 AC022532.1-201ENST00000624563 1728 ntBASIC16.04■□□□□ 0.16
HIPK4Q8NE63 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.04■□□□□ 0.16
HIPK4Q8NE63 PCDHA3-202ENST00000532566 4594 ntBASIC16.04■□□□□ 0.16
HIPK4Q8NE63 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HIPK4Q8NE63 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIPK4Q8NE63 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.04■□□□□ 0.16
HIPK4Q8NE63 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HIPK4Q8NE63 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIPK4Q8NE63 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIPK4Q8NE63 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIPK4Q8NE63 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HIPK4Q8NE63 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.04■□□□□ 0.16
HIPK4Q8NE63 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.04■□□□□ 0.16
HIPK4Q8NE63 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIPK4Q8NE63 PPT1-215ENST00000641471 2368 ntBASIC16.04■□□□□ 0.16
HIPK4Q8NE63 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.04■□□□□ 0.16
HIPK4Q8NE63 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 AC091607.1-201ENST00000490318 1060 ntBASIC16.03■□□□□ 0.16
HIPK4Q8NE63 NTF6B-201ENST00000591913 560 ntBASIC16.03■□□□□ 0.16
HIPK4Q8NE63 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 AC073592.5-201ENST00000624854 528 ntBASIC16.03■□□□□ 0.16
HIPK4Q8NE63 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 AC006449.6-201ENST00000612330 2296 ntBASIC16.03■□□□□ 0.16
HIPK4Q8NE63 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIPK4Q8NE63 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIPK4Q8NE63 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIPK4Q8NE63 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.02■□□□□ 0.16
HIPK4Q8NE63 GGT4P-201ENST00000623672 1708 ntBASIC16.02■□□□□ 0.16
HIPK4Q8NE63 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIPK4Q8NE63 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIPK4Q8NE63 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.02■□□□□ 0.16
HIPK4Q8NE63 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIPK4Q8NE63 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.02■□□□□ 0.16
HIPK4Q8NE63 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIPK4Q8NE63 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIPK4Q8NE63 SNX18-202ENST00000343017 3140 ntBASIC16.02■□□□□ 0.16
HIPK4Q8NE63 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
HIPK4Q8NE63 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.02■□□□□ 0.16
HIPK4Q8NE63 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIPK4Q8NE63 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HIPK4Q8NE63 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HIPK4Q8NE63 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HIPK4Q8NE63 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HIPK4Q8NE63 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.02■□□□□ 0.16
HIPK4Q8NE63 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
HIPK4Q8NE63 RCN1P1-201ENST00000400413 996 ntBASIC16.02■□□□□ 0.16
HIPK4Q8NE63 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms