Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NIPAL3Q6P499 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NIPAL3Q6P499 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
NIPAL3Q6P499 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NIPAL3Q6P499 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NIPAL3Q6P499 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15□□□□□ -0.01
NIPAL3Q6P499 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15□□□□□ -0.01
NIPAL3Q6P499 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15□□□□□ -0.01
NIPAL3Q6P499 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.99□□□□□ -0.01
NIPAL3Q6P499 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 AL353732.1-201ENST00000569618 1459 ntBASIC14.98□□□□□ -0.01
NIPAL3Q6P499 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.98□□□□□ -0.01
NIPAL3Q6P499 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 AC007967.2-201ENST00000432613 625 ntBASIC14.98□□□□□ -0.01
NIPAL3Q6P499 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 CXCL1P1-201ENST00000502804 216 ntBASIC14.98□□□□□ -0.01
NIPAL3Q6P499 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 MIR4492-201ENST00000581627 80 ntBASIC14.98□□□□□ -0.01
NIPAL3Q6P499 MPDU1-223ENST00000582151 728 ntBASIC14.98□□□□□ -0.01
NIPAL3Q6P499 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.98□□□□□ -0.01
NIPAL3Q6P499 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NIPAL3Q6P499 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms