Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBE2NP61088 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UBE2NP61088 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UBE2NP61088 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
UBE2NP61088 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
UBE2NP61088 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.47□□□□□ -0.09
UBE2NP61088 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UBE2NP61088 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.46□□□□□ -0.09
UBE2NP61088 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.46□□□□□ -0.09
UBE2NP61088 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2NP61088 UXT-AS1-201ENST00000590504 1525 ntBASIC14.46□□□□□ -0.09
UBE2NP61088 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2NP61088 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.46□□□□□ -0.09
UBE2NP61088 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
UBE2NP61088 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
UBE2NP61088 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
UBE2NP61088 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2NP61088 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2NP61088 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2NP61088 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2NP61088 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2NP61088 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.46□□□□□ -0.09
UBE2NP61088 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
UBE2NP61088 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2NP61088 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2NP61088 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2NP61088 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2NP61088 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2NP61088 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2NP61088 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.46□□□□□ -0.09
UBE2NP61088 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.46□□□□□ -0.09
UBE2NP61088 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
UBE2NP61088 KRT8P48-201ENST00000515599 1220 ntBASIC14.46□□□□□ -0.09
UBE2NP61088 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.46□□□□□ -0.09
UBE2NP61088 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2NP61088 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.46□□□□□ -0.09
UBE2NP61088 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2NP61088 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
UBE2NP61088 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
UBE2NP61088 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.46□□□□□ -0.09
UBE2NP61088 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.46□□□□□ -0.09
UBE2NP61088 AC022145.2-201ENST00000598203 171 ntBASIC14.46□□□□□ -0.09
UBE2NP61088 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.46□□□□□ -0.09
UBE2NP61088 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.46□□□□□ -0.09
UBE2NP61088 AL513210.1-201ENST00000629608 234 ntBASIC14.46□□□□□ -0.09
UBE2NP61088 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2NP61088 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
UBE2NP61088 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2NP61088 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.46□□□□□ -0.09
UBE2NP61088 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2NP61088 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2NP61088 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2NP61088 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
UBE2NP61088 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.46□□□□□ -0.1
UBE2NP61088 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
UBE2NP61088 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.46□□□□□ -0.1
UBE2NP61088 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
UBE2NP61088 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.1
UBE2NP61088 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
UBE2NP61088 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.46□□□□□ -0.1
UBE2NP61088 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.46□□□□□ -0.1
UBE2NP61088 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.46□□□□□ -0.1
UBE2NP61088 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
UBE2NP61088 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
UBE2NP61088 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
UBE2NP61088 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
UBE2NP61088 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
UBE2NP61088 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.45□□□□□ -0.1
UBE2NP61088 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.45□□□□□ -0.1
UBE2NP61088 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2NP61088 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2NP61088 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2NP61088 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2NP61088 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2NP61088 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2NP61088 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2NP61088 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2NP61088 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2NP61088 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.45□□□□□ -0.1
UBE2NP61088 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.45□□□□□ -0.1
UBE2NP61088 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2NP61088 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2NP61088 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
UBE2NP61088 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.45□□□□□ -0.1
UBE2NP61088 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.45□□□□□ -0.1
UBE2NP61088 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.45□□□□□ -0.1
UBE2NP61088 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2NP61088 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.45□□□□□ -0.1
UBE2NP61088 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.45□□□□□ -0.1
UBE2NP61088 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.45□□□□□ -0.1
UBE2NP61088 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.45□□□□□ -0.1
UBE2NP61088 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.45□□□□□ -0.1
UBE2NP61088 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2NP61088 UBALD1-205ENST00000590891 2641 ntBASIC14.45□□□□□ -0.1
UBE2NP61088 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.45□□□□□ -0.1
UBE2NP61088 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2NP61088 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2NP61088 AC008267.7-201ENST00000624570 1194 ntBASIC14.45□□□□□ -0.1
UBE2NP61088 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
UBE2NP61088 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms