Protein–RNA interactions for Protein: P53814

SMTN, Smoothelin, humanhuman

Predictions only

Length 917 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMTNP53814 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SMTNP53814 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMTNP53814 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
SMTNP53814 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMTNP53814 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SMTNP53814 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
SMTNP53814 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SMTNP53814 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMTNP53814 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SMTNP53814 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.2■□□□□ 0.5
SMTNP53814 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMTNP53814 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMTNP53814 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMTNP53814 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMTNP53814 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.2■□□□□ 0.5
SMTNP53814 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SMTNP53814 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMTNP53814 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.2■□□□□ 0.5
SMTNP53814 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMTNP53814 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMTNP53814 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMTNP53814 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SMTNP53814 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMTNP53814 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMTNP53814 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.2■□□□□ 0.5
SMTNP53814 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.2■□□□□ 0.5
SMTNP53814 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SMTNP53814 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.2■□□□□ 0.5
SMTNP53814 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.2■□□□□ 0.5
SMTNP53814 SNHG9-202ENST00000564014 471 ntBASIC18.2■□□□□ 0.5
SMTNP53814 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.2■□□□□ 0.5
SMTNP53814 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.2■□□□□ 0.5
SMTNP53814 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.2■□□□□ 0.5
SMTNP53814 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.2■□□□□ 0.5
SMTNP53814 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.2■□□□□ 0.5
SMTNP53814 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.2■□□□□ 0.5
SMTNP53814 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.2■□□□□ 0.5
SMTNP53814 AL691403.2-201ENST00000618460 490 ntBASIC18.2■□□□□ 0.5
SMTNP53814 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.2■□□□□ 0.5
SMTNP53814 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMTNP53814 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.2■□□□□ 0.5
SMTNP53814 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMTNP53814 PCDHA14-201ENST00000506751 2298 ntBASIC18.2■□□□□ 0.5
SMTNP53814 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMTNP53814 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.2■□□□□ 0.5
SMTNP53814 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.2■□□□□ 0.5
SMTNP53814 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SMTNP53814 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SMTNP53814 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMTNP53814 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMTNP53814 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SMTNP53814 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMTNP53814 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMTNP53814 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMTNP53814 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
SMTNP53814 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMTNP53814 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.19■□□□□ 0.5
SMTNP53814 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMTNP53814 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMTNP53814 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SMTNP53814 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMTNP53814 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMTNP53814 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.19■□□□□ 0.5
SMTNP53814 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMTNP53814 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.19■□□□□ 0.5
SMTNP53814 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SMTNP53814 AL592309.1-201ENST00000443127 649 ntBASIC18.19■□□□□ 0.5
SMTNP53814 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.19■□□□□ 0.5
SMTNP53814 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.19■□□□□ 0.5
SMTNP53814 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.19■□□□□ 0.5
SMTNP53814 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.19■□□□□ 0.5
SMTNP53814 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMTNP53814 KRT8P23-201ENST00000560090 1207 ntBASIC18.19■□□□□ 0.5
SMTNP53814 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.19■□□□□ 0.5
SMTNP53814 AC022145.2-201ENST00000598203 171 ntBASIC18.19■□□□□ 0.5
SMTNP53814 AC006538.3-201ENST00000612495 578 ntBASIC18.19■□□□□ 0.5
SMTNP53814 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SMTNP53814 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMTNP53814 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SMTNP53814 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMTNP53814 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMTNP53814 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMTNP53814 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMTNP53814 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMTNP53814 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMTNP53814 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMTNP53814 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMTNP53814 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMTNP53814 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.18■□□□□ 0.5
SMTNP53814 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMTNP53814 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SMTNP53814 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMTNP53814 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMTNP53814 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.18■□□□□ 0.5
SMTNP53814 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
SMTNP53814 AC073439.1-201ENST00000624121 1774 ntBASIC18.18■□□□□ 0.5
SMTNP53814 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMTNP53814 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SMTNP53814 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.18■□□□□ 0.5
SMTNP53814 PRYP6-201ENST00000514804 343 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms