Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSR1P43307 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSR1P43307 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSR1P43307 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSR1P43307 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSR1P43307 RPS2P28-201ENST00000314255 741 ntBASIC17.55■□□□□ 0.4
SSR1P43307 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSR1P43307 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SSR1P43307 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.55■□□□□ 0.4
SSR1P43307 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
SSR1P43307 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.55■□□□□ 0.4
SSR1P43307 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSR1P43307 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.55■□□□□ 0.4
SSR1P43307 AC091167.2-201ENST00000579581 588 ntBASIC17.55■□□□□ 0.4
SSR1P43307 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSR1P43307 AL139011.1-202ENST00000642063 584 ntBASIC17.55■□□□□ 0.4
SSR1P43307 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSR1P43307 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSR1P43307 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.55■□□□□ 0.4
SSR1P43307 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSR1P43307 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSR1P43307 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSR1P43307 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.55■□□□□ 0.4
SSR1P43307 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SSR1P43307 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.55■□□□□ 0.4
SSR1P43307 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.55■□□□□ 0.4
SSR1P43307 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSR1P43307 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSR1P43307 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSR1P43307 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSR1P43307 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSR1P43307 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR1P43307 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR1P43307 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR1P43307 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR1P43307 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.54■□□□□ 0.4
SSR1P43307 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSR1P43307 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SSR1P43307 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SSR1P43307 LINC00554-201ENST00000564841 3011 ntBASIC17.54■□□□□ 0.4
SSR1P43307 CYP2T1P-202ENST00000641596 2535 ntBASIC17.54■□□□□ 0.4
SSR1P43307 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSR1P43307 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SSR1P43307 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR1P43307 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR1P43307 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.54■□□□□ 0.4
SSR1P43307 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR1P43307 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR1P43307 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SSR1P43307 AC004870.1-201ENST00000315132 882 ntBASIC17.54■□□□□ 0.4
SSR1P43307 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.54■□□□□ 0.4
SSR1P43307 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.54■□□□□ 0.4
SSR1P43307 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SSR1P43307 KRT18P67-201ENST00000432816 1264 ntBASIC17.54■□□□□ 0.4
SSR1P43307 AC079781.3-201ENST00000449110 356 ntBASIC17.54■□□□□ 0.4
SSR1P43307 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR1P43307 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.54■□□□□ 0.4
SSR1P43307 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.54■□□□□ 0.4
SSR1P43307 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSR1P43307 RN7SL510P-201ENST00000581311 263 ntBASIC17.54■□□□□ 0.4
SSR1P43307 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.54■□□□□ 0.4
SSR1P43307 AC148477.8-201ENST00000624298 468 ntBASIC17.54■□□□□ 0.4
SSR1P43307 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR1P43307 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.54■□□□□ 0.4
SSR1P43307 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR1P43307 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.54■□□□□ 0.4
SSR1P43307 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR1P43307 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR1P43307 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR1P43307 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SSR1P43307 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
SSR1P43307 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR1P43307 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR1P43307 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR1P43307 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR1P43307 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SSR1P43307 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSR1P43307 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.54■□□□□ 0.4
SSR1P43307 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR1P43307 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR1P43307 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSR1P43307 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.54■□□□□ 0.4
SSR1P43307 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.54■□□□□ 0.4
SSR1P43307 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSR1P43307 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
SSR1P43307 ME2P1-201ENST00000426028 1970 ntBASIC17.53■□□□□ 0.4
SSR1P43307 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.53■□□□□ 0.4
SSR1P43307 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SSR1P43307 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SSR1P43307 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.53■□□□□ 0.4
SSR1P43307 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
SSR1P43307 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSR1P43307 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSR1P43307 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSR1P43307 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSR1P43307 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSR1P43307 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSR1P43307 SLC22A20-204ENST00000530038 1673 ntBASIC17.53■□□□□ 0.4
SSR1P43307 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSR1P43307 AL353732.1-201ENST00000569618 1459 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms