Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 SUZ12P1-207ENST00000583950 741 ntTSL 5 BASIC19.12■□□□□ 0.65
MYCNP04198 LINC02560-201ENST00000596379 459 ntBASIC19.12■□□□□ 0.65
MYCNP04198 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.12■□□□□ 0.65
MYCNP04198 AC107905.1-201ENST00000616204 426 ntBASIC19.12■□□□□ 0.65
MYCNP04198 AP001059.3-201ENST00000619053 235 ntBASIC19.12■□□□□ 0.65
MYCNP04198 C2-AS1-201ENST00000630806 762 ntTSL 2 BASIC19.12■□□□□ 0.65
MYCNP04198 AC009950.2-201ENST00000636548 183 ntBASIC19.12■□□□□ 0.65
MYCNP04198 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
MYCNP04198 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.12■□□□□ 0.65
MYCNP04198 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MYCNP04198 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MYCNP04198 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MYCNP04198 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MYCNP04198 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MYCNP04198 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MYCNP04198 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.11■□□□□ 0.65
MYCNP04198 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MYCNP04198 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MYCNP04198 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MYCNP04198 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MYCNP04198 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.11■□□□□ 0.65
MYCNP04198 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
MYCNP04198 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
MYCNP04198 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
MYCNP04198 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.11■□□□□ 0.65
MYCNP04198 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MYCNP04198 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MYCNP04198 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MYCNP04198 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.11■□□□□ 0.65
MYCNP04198 USP9YP14-201ENST00000430663 563 ntBASIC19.11■□□□□ 0.65
MYCNP04198 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.11■□□□□ 0.65
MYCNP04198 RNU6-551P-201ENST00000516661 103 ntBASIC19.11■□□□□ 0.65
MYCNP04198 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC19.11■□□□□ 0.65
MYCNP04198 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.11■□□□□ 0.65
MYCNP04198 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC19.11■□□□□ 0.65
MYCNP04198 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MYCNP04198 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC19.11■□□□□ 0.65
MYCNP04198 AC090116.1-201ENST00000615679 446 ntBASIC19.11■□□□□ 0.65
MYCNP04198 MIR6080-201ENST00000617359 66 ntBASIC19.11■□□□□ 0.65
MYCNP04198 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC19.11■□□□□ 0.65
MYCNP04198 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MYCNP04198 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MYCNP04198 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.11■□□□□ 0.65
MYCNP04198 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MYCNP04198 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MYCNP04198 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MYCNP04198 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.11■□□□□ 0.65
MYCNP04198 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.11■□□□□ 0.65
MYCNP04198 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
MYCNP04198 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MYCNP04198 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MYCNP04198 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
MYCNP04198 LINC00528-201ENST00000600723 2160 ntBASIC19.1■□□□□ 0.65
MYCNP04198 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
MYCNP04198 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.1■□□□□ 0.65
MYCNP04198 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MYCNP04198 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.1■□□□□ 0.65
MYCNP04198 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MYCNP04198 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
MYCNP04198 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MYCNP04198 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MYCNP04198 C9orf135-201ENST00000377197 873 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MYCNP04198 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.1■□□□□ 0.65
MYCNP04198 TMEM213-201ENST00000397602 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MYCNP04198 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC19.1■□□□□ 0.65
MYCNP04198 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC19.1■□□□□ 0.65
MYCNP04198 GPS2P2-201ENST00000430745 888 ntBASIC19.1■□□□□ 0.65
MYCNP04198 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.1■□□□□ 0.65
MYCNP04198 AL139220.1-201ENST00000436802 520 ntBASIC19.1■□□□□ 0.65
MYCNP04198 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC19.1■□□□□ 0.65
MYCNP04198 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.1■□□□□ 0.65
MYCNP04198 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC19.1■□□□□ 0.65
MYCNP04198 AC107918.2-201ENST00000530817 355 ntBASIC19.1■□□□□ 0.65
MYCNP04198 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.1■□□□□ 0.65
MYCNP04198 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MYCNP04198 AC026150.2-201ENST00000564693 1156 ntBASIC19.1■□□□□ 0.65
MYCNP04198 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.1■□□□□ 0.65
MYCNP04198 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.1■□□□□ 0.65
MYCNP04198 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.1■□□□□ 0.65
MYCNP04198 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MYCNP04198 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MYCNP04198 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
MYCNP04198 NFIC-211ENST00000641145 8399 ntBASIC19.1■□□□□ 0.65
MYCNP04198 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.1■□□□□ 0.65
MYCNP04198 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.1■□□□□ 0.65
MYCNP04198 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MYCNP04198 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MYCNP04198 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
MYCNP04198 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MYCNP04198 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MYCNP04198 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MYCNP04198 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MYCNP04198 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.09■□□□□ 0.65
MYCNP04198 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
MYCNP04198 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
MYCNP04198 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MYCNP04198 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MYCNP04198 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MYCNP04198 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MYCNP04198 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms