RNA–Protein interactions for RNA: ENST00000558572.1

AC012404.2-201, humanhuman

TSL 3 BASIC

Gene AC012404.2, Length 481 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012404.2-201ENST00000558572 AEBP2Q6ZN18 517 aaPredicted RBP32.25■■■□□ 2.75
AC012404.2-201ENST00000558572 CHIC1Q5VXU3 224 aa30.87■■■□□ 2.53
AC012404.2-201ENST00000558572 SENP3Q9H4L4 574 aaPredicted RBP27.62■■■□□ 2.01
AC012404.2-201ENST00000558572 PHF23Q9BUL5 403 aaPredicted RBP27.21■■□□□ 1.95
AC012404.2-201ENST00000558572 FOXD1Q16676 465 aa25.63■■□□□ 1.69
AC012404.2-201ENST00000558572 PLPPR3Q6T4P5 718 aa24.78■■□□□ 1.56
AC012404.2-201ENST00000558572 MSH5O43196 834 aa24.04■■□□□ 1.44
AC012404.2-201ENST00000558572 PIAS4Q8N2W9 510 aaPredicted RBP24.03■■□□□ 1.44
AC012404.2-201ENST00000558572 PPP6R1Q9UPN7 881 aa24.03■■□□□ 1.44
AC012404.2-201ENST00000558572 ADRA2BP18089 450 aa23.98■■□□□ 1.43
AC012404.2-201ENST00000558572 POTEDQ86YR6 584 aa23.09■■□□□ 1.29
AC012404.2-201ENST00000558572 SCAF1Q9H7N4 1312 aaKnown RBP22.1■■□□□ 1.13
AC012404.2-201ENST00000558572 MAPK8IP2Q13387 824 aaPredicted RBP21.95■■□□□ 1.1
AC012404.2-201ENST00000558572 DMRT2Q9Y5R5 561 aa21.9■■□□□ 1.1
AC012404.2-201ENST00000558572 PPP4R3CPQ6ZMV5 832 aa21.69■■□□□ 1.06
AC012404.2-201ENST00000558572 CNKSR2Q8WXI2 1034 aa21.3■■□□□ 1
AC012404.2-201ENST00000558572 HOXD11P31277 338 aaPredicted RBP21.17■□□□□ 0.98
AC012404.2-201ENST00000558572 RNF216Q9NWF9 866 aaPredicted RBP21.07■□□□□ 0.96
AC012404.2-201ENST00000558572 NCBP3Q53F19 620 aaKnown RBP20.99■□□□□ 0.95
AC012404.2-201ENST00000558572 DCAF8L1A6NGE4 600 aa20.95■□□□□ 0.94
AC012404.2-201ENST00000558572 NPM3O75607 178 aaKnown RBP20.58■□□□□ 0.89
AC012404.2-201ENST00000558572 DNAJC5BQ9UF47 199 aa20.5■□□□□ 0.87
AC012404.2-201ENST00000558572 CACNB1Q02641 598 aaPredicted RBP20.47■□□□□ 0.87
AC012404.2-201ENST00000558572 RNF39Q9H2S5 420 aa20.47■□□□□ 0.87
AC012404.2-201ENST00000558572 KCNA4P22459 653 aa20.3■□□□□ 0.84
AC012404.2-201ENST00000558572 C1QBPQ07021 282 aaKnown RBP20.23■□□□□ 0.83
AC012404.2-201ENST00000558572 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.15■□□□□ 0.82
AC012404.2-201ENST00000558572 U3KPZ7 1027 aaPredicted RBP19.72■□□□□ 0.75
AC012404.2-201ENST00000558572 SLC4A2P04920 1241 aa19.59■□□□□ 0.73
AC012404.2-201ENST00000558572 CAPN15O75808 1086 aa19.36■□□□□ 0.69
AC012404.2-201ENST00000558572 APLP2Q06481 763 aa19.35■□□□□ 0.69
AC012404.2-201ENST00000558572 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.34■□□□□ 0.69
AC012404.2-201ENST00000558572 HNRNPUL2Q1KMD3 747 aaKnown RBP19.34■□□□□ 0.69
AC012404.2-201ENST00000558572 SPINK5Q9NQ38 1064 aaPredicted RBP19.34■□□□□ 0.69
AC012404.2-201ENST00000558572 SLC4A1APQ9BWU0 796 aaKnown RBP19.25■□□□□ 0.67
AC012404.2-201ENST00000558572 DSG3P32926 999 aa19.21■□□□□ 0.67
AC012404.2-201ENST00000558572 SAMD1Q6SPF0 538 aaPredicted RBP19.2■□□□□ 0.66
AC012404.2-201ENST00000558572 ZNF219Q9P2Y4 722 aaPredicted RBP19.13■□□□□ 0.65
AC012404.2-201ENST00000558572 MYCNP04198 464 aaPredicted RBP19.11■□□□□ 0.65
AC012404.2-201ENST00000558572 TRHP20396 242 aaPredicted RBP19.06■□□□□ 0.64
AC012404.2-201ENST00000558572 FOXD4L1Q9NU39 408 aa18.97■□□□□ 0.63
AC012404.2-201ENST00000558572 ABCB7O75027 752 aa18.87■□□□□ 0.61
AC012404.2-201ENST00000558572 ZBTB22O15209 634 aa18.63■□□□□ 0.57
AC012404.2-201ENST00000558572 POLA2Q14181 598 aa18.6■□□□□ 0.57
AC012404.2-201ENST00000558572 ATF5Q9Y2D1 282 aaPredicted RBP18.52■□□□□ 0.56
AC012404.2-201ENST00000558572 ATXN8OSP0DMR3 200 aa18.43■□□□□ 0.54
AC012404.2-201ENST00000558572 RBM42Q9BTD8 480 aaKnown RBP18.42■□□□□ 0.54
AC012404.2-201ENST00000558572 ZBTB12Q9Y330 459 aaPredicted RBP18.36■□□□□ 0.53
AC012404.2-201ENST00000558572 POTEHQ6S545 545 aa18.15■□□□□ 0.5
AC012404.2-201ENST00000558572 OSCARQ8IYS5 282 aa17.99■□□□□ 0.47
AC012404.2-201ENST00000558572 AKT1S1Q96B36 256 aa17.99■□□□□ 0.47
AC012404.2-201ENST00000558572 CSRNP3Q8WYN3 585 aa17.94■□□□□ 0.46
AC012404.2-201ENST00000558572 FBLN2P98095 1184 aa17.93■□□□□ 0.46
AC012404.2-201ENST00000558572 CHRDL2Q6WN34 429 aa17.87■□□□□ 0.45
AC012404.2-201ENST00000558572 EHMT2Q96KQ7 1210 aa17.78■□□□□ 0.44
AC012404.2-201ENST00000558572 REM2Q8IYK8 340 aaPredicted RBP17.77■□□□□ 0.44
AC012404.2-201ENST00000558572 SPDYE2BA6NHP3 402 aa17.76■□□□□ 0.43
AC012404.2-201ENST00000558572 SPDYE6P0CI01 402 aa17.76■□□□□ 0.43
AC012404.2-201ENST00000558572 SPDYE2Q495Y8 402 aa17.76■□□□□ 0.43
AC012404.2-201ENST00000558572 MKRN4PQ13434 485 aaPredicted RBP17.7■□□□□ 0.42
AC012404.2-201ENST00000558572 PITPNM1O00562 1244 aa17.57■□□□□ 0.4
AC012404.2-201ENST00000558572 ZNF692Q9BU19 519 aaPredicted RBP17.53■□□□□ 0.4
AC012404.2-201ENST00000558572 SSUH2Q9Y2M2 353 aa17.5■□□□□ 0.39
AC012404.2-201ENST00000558572 PIP4P2Q8N4L2 257 aa17.46■□□□□ 0.39
AC012404.2-201ENST00000558572 FXR2P51116 673 aaKnown RBP eCLIP17.41■□□□□ 0.38
AC012404.2-201ENST00000558572 SPDYE1Q8NFV5 336 aaPredicted RBP17.4■□□□□ 0.38
AC012404.2-201ENST00000558572 CLEC11AQ9Y240 323 aa17.3■□□□□ 0.36
AC012404.2-201ENST00000558572 PABPN1Q86U42 306 aaKnown RBP eCLIP17.25■□□□□ 0.35
AC012404.2-201ENST00000558572 PRKAR2AP13861 404 aaKnown RBP17.13■□□□□ 0.33
AC012404.2-201ENST00000558572 HAX1O00165 279 aa17.11■□□□□ 0.33
AC012404.2-201ENST00000558572 SP7Q8TDD2 431 aaPredicted RBP17.11■□□□□ 0.33
AC012404.2-201ENST00000558572 PRR29P0C7W0 189 aa17.08■□□□□ 0.32
AC012404.2-201ENST00000558572 SPDYE4A6NLX3 237 aa17.01■□□□□ 0.31
AC012404.2-201ENST00000558572 STAG3Q9UJ98 1225 aa16.92■□□□□ 0.3
AC012404.2-201ENST00000558572 CHADLQ6NUI6 762 aa16.91■□□□□ 0.3
AC012404.2-201ENST00000558572 C19orf67A6NJJ6 358 aa16.85■□□□□ 0.29
AC012404.2-201ENST00000558572 EVX2Q03828 476 aa16.82■□□□□ 0.28
AC012404.2-201ENST00000558572 FARP1Q9Y4F1 1045 aaPredicted RBP16.74■□□□□ 0.27
AC012404.2-201ENST00000558572 CREBZFQ9NS37 354 aa16.65■□□□□ 0.26
AC012404.2-201ENST00000558572 PROM2Q8N271 834 aa16.64■□□□□ 0.25
AC012404.2-201ENST00000558572 CD44P16070 742 aaKnown RBP16.6■□□□□ 0.25
AC012404.2-201ENST00000558572 GABBR2O75899 941 aa16.54■□□□□ 0.24
AC012404.2-201ENST00000558572 CLCN6P51797 869 aa16.49■□□□□ 0.23
AC012404.2-201ENST00000558572 NPM1P06748 294 aaKnown RBP eCLIP16.44■□□□□ 0.22
AC012404.2-201ENST00000558572 ZNF579Q8NAF0 562 aaKnown RBP16.39■□□□□ 0.21
AC012404.2-201ENST00000558572 ZRANB1Q9UGI0 708 aa16.39■□□□□ 0.21
AC012404.2-201ENST00000558572 MNX1P50219 401 aaPredicted RBP16.38■□□□□ 0.21
AC012404.2-201ENST00000558572 PAK3O75914 559 aaPredicted RBP16.37■□□□□ 0.21
AC012404.2-201ENST00000558572 FKBP8Q14318 412 aa16.29■□□□□ 0.2
AC012404.2-201ENST00000558572 PLEKHG5O94827 1062 aa16.28■□□□□ 0.2
AC012404.2-201ENST00000558572 MIER1Q8N108 512 aa16.2■□□□□ 0.18
AC012404.2-201ENST00000558572 DCBLD2Q96PD2 775 aa16.16■□□□□ 0.18
AC012404.2-201ENST00000558572 POTEIP0CG38 1075 aa16.13■□□□□ 0.17
AC012404.2-201ENST00000558572 PHF12Q96QT6 1004 aa16.13■□□□□ 0.17
AC012404.2-201ENST00000558572 PLCD3Q8N3E9 789 aa16.11■□□□□ 0.17
AC012404.2-201ENST00000558572 GALR2O43603 387 aaPredicted RBP16.1■□□□□ 0.17
AC012404.2-201ENST00000558572 ZBTB47Q9UFB7 747 aaPredicted RBP16.08■□□□□ 0.16
AC012404.2-201ENST00000558572 TSPYL2Q9H2G4 693 aaPredicted RBP16.05■□□□□ 0.16
AC012404.2-201ENST00000558572 LHX8Q68G74 356 aa16.04■□□□□ 0.16
AC012404.2-201ENST00000558572 FBXO3Q9UK99 471 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms