RNA–Protein interactions for RNA: ENST00000565774.5

TM6SF1-207, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,020 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-207ENST00000565774 AEBP2Q6ZN18 517 aaPredicted RBP30.11■■■□□ 2.41
TM6SF1-207ENST00000565774 CHIC1Q5VXU3 224 aa29.75■■■□□ 2.35
TM6SF1-207ENST00000565774 PHF23Q9BUL5 403 aaPredicted RBP26.09■■□□□ 1.77
TM6SF1-207ENST00000565774 SENP3Q9H4L4 574 aaPredicted RBP25.69■■□□□ 1.7
TM6SF1-207ENST00000565774 PLPPR3Q6T4P5 718 aa24.33■■□□□ 1.49
TM6SF1-207ENST00000565774 FOXD1Q16676 465 aa23.7■■□□□ 1.38
TM6SF1-207ENST00000565774 ADRA2BP18089 450 aa22.97■■□□□ 1.27
TM6SF1-207ENST00000565774 PPP6R1Q9UPN7 881 aa22.93■■□□□ 1.26
TM6SF1-207ENST00000565774 PIAS4Q8N2W9 510 aaPredicted RBP22.49■■□□□ 1.19
TM6SF1-207ENST00000565774 MSH5O43196 834 aa21.9■■□□□ 1.1
TM6SF1-207ENST00000565774 PPP4R3CPQ6ZMV5 832 aa21.42■■□□□ 1.02
TM6SF1-207ENST00000565774 SCAF1Q9H7N4 1312 aaKnown RBP21.21■□□□□ 0.99
TM6SF1-207ENST00000565774 KCNA4P22459 653 aa21.16■□□□□ 0.98
TM6SF1-207ENST00000565774 NCBP3Q53F19 620 aaKnown RBP21.05■□□□□ 0.96
TM6SF1-207ENST00000565774 CNKSR2Q8WXI2 1034 aa20.81■□□□□ 0.92
TM6SF1-207ENST00000565774 MAPK8IP2Q13387 824 aaPredicted RBP20.73■□□□□ 0.91
TM6SF1-207ENST00000565774 NPM3O75607 178 aaKnown RBP20.6■□□□□ 0.89
TM6SF1-207ENST00000565774 DMRT2Q9Y5R5 561 aa20.49■□□□□ 0.87
TM6SF1-207ENST00000565774 RNF216Q9NWF9 866 aaPredicted RBP20.33■□□□□ 0.85
TM6SF1-207ENST00000565774 SLC4A1APQ9BWU0 796 aaKnown RBP20.26■□□□□ 0.83
TM6SF1-207ENST00000565774 HOXD11P31277 338 aaPredicted RBP20.16■□□□□ 0.82
TM6SF1-207ENST00000565774 DNAJC5BQ9UF47 199 aa20■□□□□ 0.79
TM6SF1-207ENST00000565774 EHMT2Q96KQ7 1210 aa19.93■□□□□ 0.78
TM6SF1-207ENST00000565774 DCAF8L1A6NGE4 600 aa19.65■□□□□ 0.74
TM6SF1-207ENST00000565774 CSRNP3Q8WYN3 585 aa19.53■□□□□ 0.72
TM6SF1-207ENST00000565774 FOXD4L1Q9NU39 408 aa19.48■□□□□ 0.71
TM6SF1-207ENST00000565774 ZBTB22O15209 634 aa19.41■□□□□ 0.7
TM6SF1-207ENST00000565774 POTEDQ86YR6 584 aa19.4■□□□□ 0.7
TM6SF1-207ENST00000565774 SLC4A2P04920 1241 aa19.35■□□□□ 0.69
TM6SF1-207ENST00000565774 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.28■□□□□ 0.68
TM6SF1-207ENST00000565774 MYCNP04198 464 aaPredicted RBP19.11■□□□□ 0.65
TM6SF1-207ENST00000565774 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.91■□□□□ 0.62
TM6SF1-207ENST00000565774 HNRNPUL2Q1KMD3 747 aaKnown RBP18.91■□□□□ 0.62
TM6SF1-207ENST00000565774 U3KPZ7 1027 aaPredicted RBP18.9■□□□□ 0.62
TM6SF1-207ENST00000565774 SAMD1Q6SPF0 538 aaPredicted RBP18.82■□□□□ 0.6
TM6SF1-207ENST00000565774 ATXN8OSP0DMR3 200 aa18.81■□□□□ 0.6
TM6SF1-207ENST00000565774 APLP2Q06481 763 aa18.71■□□□□ 0.59
TM6SF1-207ENST00000565774 RNF39Q9H2S5 420 aa18.7■□□□□ 0.58
TM6SF1-207ENST00000565774 C1QBPQ07021 282 aaKnown RBP18.56■□□□□ 0.56
TM6SF1-207ENST00000565774 ATF5Q9Y2D1 282 aaPredicted RBP18.42■□□□□ 0.54
TM6SF1-207ENST00000565774 ZNF219Q9P2Y4 722 aaPredicted RBP18.32■□□□□ 0.52
TM6SF1-207ENST00000565774 CAPN15O75808 1086 aa18.3■□□□□ 0.52
TM6SF1-207ENST00000565774 SPINK5Q9NQ38 1064 aaPredicted RBP18.29■□□□□ 0.52
TM6SF1-207ENST00000565774 TRHP20396 242 aaPredicted RBP18.25■□□□□ 0.51
TM6SF1-207ENST00000565774 CACNB1Q02641 598 aaPredicted RBP18.1■□□□□ 0.49
TM6SF1-207ENST00000565774 POLA2Q14181 598 aa18■□□□□ 0.47
TM6SF1-207ENST00000565774 ABCB7O75027 752 aa17.92■□□□□ 0.46
TM6SF1-207ENST00000565774 DSG3P32926 999 aa17.86■□□□□ 0.45
TM6SF1-207ENST00000565774 FBLN2P98095 1184 aa17.84■□□□□ 0.45
TM6SF1-207ENST00000565774 ZBTB12Q9Y330 459 aaPredicted RBP17.84■□□□□ 0.45
TM6SF1-207ENST00000565774 FKBP8Q14318 412 aa17.71■□□□□ 0.43
TM6SF1-207ENST00000565774 MKRN4PQ13434 485 aaPredicted RBP17.67■□□□□ 0.42
TM6SF1-207ENST00000565774 SPDYE4A6NLX3 237 aa17.49■□□□□ 0.39
TM6SF1-207ENST00000565774 OSCARQ8IYS5 282 aa17.36■□□□□ 0.37
TM6SF1-207ENST00000565774 SPDYE2BA6NHP3 402 aa17.31■□□□□ 0.36
TM6SF1-207ENST00000565774 SPDYE6P0CI01 402 aa17.31■□□□□ 0.36
TM6SF1-207ENST00000565774 SPDYE2Q495Y8 402 aa17.31■□□□□ 0.36
TM6SF1-207ENST00000565774 ZNF692Q9BU19 519 aaPredicted RBP17.26■□□□□ 0.35
TM6SF1-207ENST00000565774 PROM2Q8N271 834 aa17.17■□□□□ 0.34
TM6SF1-207ENST00000565774 RBM42Q9BTD8 480 aaKnown RBP17.16■□□□□ 0.34
TM6SF1-207ENST00000565774 SSUH2Q9Y2M2 353 aa17.14■□□□□ 0.33
TM6SF1-207ENST00000565774 FBXO3Q9UK99 471 aa17.13■□□□□ 0.33
TM6SF1-207ENST00000565774 PABPN1Q86U42 306 aaKnown RBP eCLIP17.02■□□□□ 0.32
TM6SF1-207ENST00000565774 AKT1S1Q96B36 256 aa16.94■□□□□ 0.3
TM6SF1-207ENST00000565774 STAG3Q9UJ98 1225 aa16.88■□□□□ 0.29
TM6SF1-207ENST00000565774 VASPP50552 380 aaPredicted RBP16.81■□□□□ 0.28
TM6SF1-207ENST00000565774 SPDYE1Q8NFV5 336 aaPredicted RBP16.76■□□□□ 0.27
TM6SF1-207ENST00000565774 REM2Q8IYK8 340 aaPredicted RBP16.72■□□□□ 0.27
TM6SF1-207ENST00000565774 CLEC11AQ9Y240 323 aa16.64■□□□□ 0.25
TM6SF1-207ENST00000565774 AMER1Q5JTC6 1135 aaPredicted RBP16.63■□□□□ 0.25
TM6SF1-207ENST00000565774 PLCD3Q8N3E9 789 aa16.62■□□□□ 0.25
TM6SF1-207ENST00000565774 PLEKHG5O94827 1062 aa16.6■□□□□ 0.25
TM6SF1-207ENST00000565774 MIER1Q8N108 512 aa16.59■□□□□ 0.25
TM6SF1-207ENST00000565774 PRR29P0C7W0 189 aa16.54■□□□□ 0.24
TM6SF1-207ENST00000565774 PITPNM1O00562 1244 aa16.52■□□□□ 0.24
TM6SF1-207ENST00000565774 IFNLR1Q8IU57 520 aaPredicted RBP16.52■□□□□ 0.24
TM6SF1-207ENST00000565774 KLHL34Q8N239 644 aa16.52■□□□□ 0.24
TM6SF1-207ENST00000565774 ZBTB47Q9UFB7 747 aaPredicted RBP16.49■□□□□ 0.23
TM6SF1-207ENST00000565774 RTN4Q9NQC3 1192 aaKnown RBP16.47■□□□□ 0.23
TM6SF1-207ENST00000565774 SPOCK2Q92563 424 aa16.38■□□□□ 0.21
TM6SF1-207ENST00000565774 CREBZFQ9NS37 354 aa16.3■□□□□ 0.2
TM6SF1-207ENST00000565774 CHRDL2Q6WN34 429 aa16.26■□□□□ 0.19
TM6SF1-207ENST00000565774 NPM1P06748 294 aaKnown RBP eCLIP16.17■□□□□ 0.18
TM6SF1-207ENST00000565774 FXR2P51116 673 aaKnown RBP eCLIP16.15■□□□□ 0.18
TM6SF1-207ENST00000565774 PRKAR2AP13861 404 aaKnown RBP16.14■□□□□ 0.17
TM6SF1-207ENST00000565774 MNX1P50219 401 aaPredicted RBP16.13■□□□□ 0.17
TM6SF1-207ENST00000565774 CHADLQ6NUI6 762 aa16.13■□□□□ 0.17
TM6SF1-207ENST00000565774 CIZ1Q9ULV3 898 aaPredicted RBP16.09■□□□□ 0.17
TM6SF1-207ENST00000565774 PIP4P2Q8N4L2 257 aa16.07■□□□□ 0.16
TM6SF1-207ENST00000565774 FARP1Q9Y4F1 1045 aaPredicted RBP16.07■□□□□ 0.16
TM6SF1-207ENST00000565774 NUBP1P53384 320 aa16.06■□□□□ 0.16
TM6SF1-207ENST00000565774 GSE1Q14687 1217 aa16.06■□□□□ 0.16
TM6SF1-207ENST00000565774 PKD2Q13563 968 aa16.05■□□□□ 0.16
TM6SF1-207ENST00000565774 FAM212AQ96EL1 285 aa16.04■□□□□ 0.16
TM6SF1-207ENST00000565774 ECM2O94769 699 aaPredicted RBP16.01■□□□□ 0.15
TM6SF1-207ENST00000565774 TRIM41Q8WV44 630 aa16.01■□□□□ 0.15
TM6SF1-207ENST00000565774 DCAF8Q5TAQ9 597 aa16■□□□□ 0.15
TM6SF1-207ENST00000565774 RASEFQ8IZ41 740 aa15.94■□□□□ 0.14
TM6SF1-207ENST00000565774 DCAF8L2P0C7V8 631 aa15.9■□□□□ 0.14
TM6SF1-207ENST00000565774 PAK3O75914 559 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms